Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CTR9Q6PD62 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.59■□□□□ 0.73
CTR9Q6PD62 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CTR9Q6PD62 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.59■□□□□ 0.73
CTR9Q6PD62 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.59■□□□□ 0.73
CTR9Q6PD62 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 PCDHA12-202ENST00000613593 2588 ntBASIC19.59■□□□□ 0.73
CTR9Q6PD62 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CTR9Q6PD62 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.59■□□□□ 0.73
CTR9Q6PD62 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTR9Q6PD62 AGGF1P2-201ENST00000426656 2106 ntBASIC19.58■□□□□ 0.73
CTR9Q6PD62 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CTR9Q6PD62 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.58■□□□□ 0.73
CTR9Q6PD62 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CTR9Q6PD62 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.58■□□□□ 0.73
CTR9Q6PD62 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTR9Q6PD62 AP3S2-216ENST00000617003 1561 ntBASIC19.58■□□□□ 0.73
CTR9Q6PD62 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTR9Q6PD62 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
CTR9Q6PD62 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTR9Q6PD62 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.58■□□□□ 0.73
CTR9Q6PD62 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CTR9Q6PD62 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTR9Q6PD62 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTR9Q6PD62 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CTR9Q6PD62 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.58■□□□□ 0.72
CTR9Q6PD62 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.58■□□□□ 0.72
CTR9Q6PD62 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.58■□□□□ 0.72
CTR9Q6PD62 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.58■□□□□ 0.72
CTR9Q6PD62 AC093512.1-201ENST00000617969 520 ntBASIC19.58■□□□□ 0.72
CTR9Q6PD62 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTR9Q6PD62 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTR9Q6PD62 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTR9Q6PD62 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CTR9Q6PD62 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTR9Q6PD62 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTR9Q6PD62 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTR9Q6PD62 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTR9Q6PD62 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
CTR9Q6PD62 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTR9Q6PD62 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTR9Q6PD62 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTR9Q6PD62 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTR9Q6PD62 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTR9Q6PD62 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
CTR9Q6PD62 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
CTR9Q6PD62 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
CTR9Q6PD62 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTR9Q6PD62 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.57■□□□□ 0.72
CTR9Q6PD62 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CTR9Q6PD62 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.57■□□□□ 0.72
CTR9Q6PD62 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTR9Q6PD62 AC092171.3-201ENST00000610122 2651 ntBASIC19.57■□□□□ 0.72
CTR9Q6PD62 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.57■□□□□ 0.72
CTR9Q6PD62 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTR9Q6PD62 GGT3P-204ENST00000453783 1664 ntBASIC19.57■□□□□ 0.72
CTR9Q6PD62 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTR9Q6PD62 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTR9Q6PD62 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTR9Q6PD62 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTR9Q6PD62 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.57■□□□□ 0.72
CTR9Q6PD62 AC093724.1-201ENST00000448659 1027 ntBASIC19.57■□□□□ 0.72
CTR9Q6PD62 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTR9Q6PD62 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.57■□□□□ 0.72
CTR9Q6PD62 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.57■□□□□ 0.72
CTR9Q6PD62 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.57■□□□□ 0.72
CTR9Q6PD62 AC051619.7-201ENST00000568314 623 ntBASIC19.57■□□□□ 0.72
CTR9Q6PD62 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.57■□□□□ 0.72
CTR9Q6PD62 SPTSSB-204ENST00000617024 1292 ntBASIC19.57■□□□□ 0.72
CTR9Q6PD62 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTR9Q6PD62 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTR9Q6PD62 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTR9Q6PD62 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTR9Q6PD62 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
CTR9Q6PD62 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.57■□□□□ 0.72
CTR9Q6PD62 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.56■□□□□ 0.72
CTR9Q6PD62 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CTR9Q6PD62 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.56■□□□□ 0.72
CTR9Q6PD62 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTR9Q6PD62 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTR9Q6PD62 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTR9Q6PD62 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTR9Q6PD62 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTR9Q6PD62 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.56■□□□□ 0.72
CTR9Q6PD62 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.56■□□□□ 0.72
CTR9Q6PD62 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.56■□□□□ 0.72
CTR9Q6PD62 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTR9Q6PD62 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.56■□□□□ 0.72
CTR9Q6PD62 RARRES2P9-201ENST00000565168 469 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms