Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.12■□□□□ 0.33
TRNP1Q6NT89 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 ACTG1P14-201ENST00000446382 1122 ntBASIC17.12■□□□□ 0.33
TRNP1Q6NT89 TIMM8BP1-201ENST00000452384 211 ntBASIC17.12■□□□□ 0.33
TRNP1Q6NT89 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 AC069335.1-201ENST00000489972 472 ntBASIC17.12■□□□□ 0.33
TRNP1Q6NT89 AC092865.5-201ENST00000545435 363 ntBASIC17.12■□□□□ 0.33
TRNP1Q6NT89 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 AC022145.2-201ENST00000598203 171 ntBASIC17.12■□□□□ 0.33
TRNP1Q6NT89 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 AC055717.3-201ENST00000622967 595 ntBASIC17.12■□□□□ 0.33
TRNP1Q6NT89 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 AC105339.1-204ENST00000636249 355 ntBASIC17.12■□□□□ 0.33
TRNP1Q6NT89 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 U82695.1-201ENST00000635752 1889 ntBASIC17.12■□□□□ 0.33
TRNP1Q6NT89 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRNP1Q6NT89 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 AL513523.2-202ENST00000427283 2040 ntBASIC17.11■□□□□ 0.33
TRNP1Q6NT89 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 AC024909.3-201ENST00000611513 2257 ntBASIC17.11■□□□□ 0.33
TRNP1Q6NT89 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 SPDYE11-202ENST00000450699 704 ntBASIC17.11■□□□□ 0.33
TRNP1Q6NT89 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 FAM86C2P-203ENST00000528684 1004 ntBASIC17.11■□□□□ 0.33
TRNP1Q6NT89 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 AC093520.2-201ENST00000561830 333 ntBASIC17.11■□□□□ 0.33
TRNP1Q6NT89 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 SPDYE9P-201ENST00000570642 692 ntBASIC17.11■□□□□ 0.33
TRNP1Q6NT89 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 SPDYE10P-202ENST00000612005 668 ntBASIC17.11■□□□□ 0.33
TRNP1Q6NT89 SPDYE8P-202ENST00000612377 668 ntBASIC17.11■□□□□ 0.33
TRNP1Q6NT89 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 AC008267.7-201ENST00000624570 1194 ntBASIC17.11■□□□□ 0.33
TRNP1Q6NT89 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.11■□□□□ 0.33
TRNP1Q6NT89 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRNP1Q6NT89 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms