Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC26.44■■□□□ 1.82
SNAPC4Q5SXM2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC26.44■■□□□ 1.82
SNAPC4Q5SXM2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SNAPC4Q5SXM2 RHBDF1P1-201ENST00000427504 1941 ntBASIC26.44■■□□□ 1.82
SNAPC4Q5SXM2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SNAPC4Q5SXM2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
SNAPC4Q5SXM2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 C1QBPP1-201ENST00000400117 770 ntBASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 CNN2P8-201ENST00000421872 913 ntBASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 PFN2-215ENST00000497148 743 ntTSL 4 BASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 AC134312.5-201ENST00000568031 1313 ntBASIC26.43■■□□□ 1.82
SNAPC4Q5SXM2 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 Z93015.1-201ENST00000451718 390 ntBASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 AC009486.1-201ENST00000569860 813 ntBASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 VDAC1P7-201ENST00000462417 847 ntBASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 HIST2H2BC-201ENST00000498492 580 ntBASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
SNAPC4Q5SXM2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 PCDHB17P-201ENST00000539533 2393 ntBASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 HINT2P1-201ENST00000419438 481 ntBASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNAPC4Q5SXM2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
SNAPC4Q5SXM2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SNAPC4Q5SXM2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SNAPC4Q5SXM2 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC26.4■■□□□ 1.82
SNAPC4Q5SXM2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SNAPC4Q5SXM2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC26.4■■□□□ 1.82
SNAPC4Q5SXM2 RPS3-201ENST00000278572 907 ntTSL 3 BASIC26.4■■□□□ 1.82
SNAPC4Q5SXM2 AL591846.1-201ENST00000451736 433 ntBASIC26.4■■□□□ 1.82
SNAPC4Q5SXM2 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC26.4■■□□□ 1.82
SNAPC4Q5SXM2 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC26.4■■□□□ 1.82
SNAPC4Q5SXM2 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC26.4■■□□□ 1.82
SNAPC4Q5SXM2 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC26.4■■□□□ 1.82
SNAPC4Q5SXM2 CHMP4BP1-201ENST00000556017 588 ntBASIC26.4■■□□□ 1.82
SNAPC4Q5SXM2 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC26.4■■□□□ 1.82
SNAPC4Q5SXM2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SNAPC4Q5SXM2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms