Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC12.52□□□□□ -0.41
LINC01559Q495D7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC12.52□□□□□ -0.41
LINC01559Q495D7 AC090616.6-201ENST00000582640 721 ntBASIC12.52□□□□□ -0.41
LINC01559Q495D7 AP005202.1-202ENST00000583065 748 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC01559Q495D7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC01559Q495D7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC01559Q495D7 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
LINC01559Q495D7 TMEM191A-211ENST00000637163 1067 ntBASIC12.52□□□□□ -0.41
LINC01559Q495D7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LINC01559Q495D7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01559Q495D7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01559Q495D7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
LINC01559Q495D7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01559Q495D7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC01559Q495D7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
LINC01559Q495D7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LINC01559Q495D7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01559Q495D7 IRAK4-202ENST00000440781 1409 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC01559Q495D7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC01559Q495D7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
LINC01559Q495D7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01559Q495D7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC01559Q495D7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01559Q495D7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
LINC01559Q495D7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
LINC01559Q495D7 AC132872.4-202ENST00000622924 2756 ntBASIC12.52□□□□□ -0.41
LINC01559Q495D7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01559Q495D7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LINC01559Q495D7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 LIAS-204ENST00000424936 1011 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 AC003075.1-206ENST00000448664 541 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 MTND1P6-201ENST00000523621 946 ntBASIC12.51□□□□□ -0.41
LINC01559Q495D7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 AC011467.2-201ENST00000598425 242 ntBASIC12.51□□□□□ -0.41
LINC01559Q495D7 AC013467.2-201ENST00000605472 835 ntBASIC12.51□□□□□ -0.41
LINC01559Q495D7 AC009039.2-201ENST00000624524 529 ntBASIC12.51□□□□□ -0.41
LINC01559Q495D7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01559Q495D7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01559Q495D7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC01559Q495D7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 AC138969.2-201ENST00000532739 9932 ntBASIC12.5□□□□□ -0.41
LINC01559Q495D7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01559Q495D7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms