Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
DCAF4L1Q3SXM0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
DCAF4L1Q3SXM0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
DCAF4L1Q3SXM0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
DCAF4L1Q3SXM0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 FO538757.1-201ENST00000623083 1397 ntBASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 AC093214.1-201ENST00000511688 1107 ntBASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 U82695.1-201ENST00000635752 1889 ntBASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DCAF4L1Q3SXM0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 BASP1P1-201ENST00000430708 665 ntBASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 RNA5SP421-201ENST00000516864 134 ntBASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 IGHV3-42-201ENST00000520410 361 ntBASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 SPCS2P1-201ENST00000561636 679 ntBASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 AC073592.8-201ENST00000624126 511 ntBASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 UBALD1-205ENST00000590891 2641 ntBASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DCAF4L1Q3SXM0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DCAF4L1Q3SXM0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms