Protein–RNA interactions for Protein: P80217

IFI35, Interferon-induced 35 kDa protein, humanhuman

Predicted RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFI35P80217 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFI35P80217 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFI35P80217 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFI35P80217 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFI35P80217 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFI35P80217 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.2■□□□□ 0.34
IFI35P80217 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.2■□□□□ 0.34
IFI35P80217 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.2■□□□□ 0.34
IFI35P80217 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.2■□□□□ 0.34
IFI35P80217 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFI35P80217 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
IFI35P80217 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
IFI35P80217 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFI35P80217 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFI35P80217 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.2■□□□□ 0.34
IFI35P80217 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
IFI35P80217 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.2■□□□□ 0.34
IFI35P80217 PRSS29P-201ENST00000440800 595 ntBASIC17.2■□□□□ 0.34
IFI35P80217 AC108751.1-201ENST00000490852 363 ntBASIC17.2■□□□□ 0.34
IFI35P80217 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.2■□□□□ 0.34
IFI35P80217 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.2■□□□□ 0.34
IFI35P80217 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IFI35P80217 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.2■□□□□ 0.34
IFI35P80217 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.2■□□□□ 0.34
IFI35P80217 AC010654.1-201ENST00000615722 808 ntBASIC17.2■□□□□ 0.34
IFI35P80217 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFI35P80217 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IFI35P80217 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IFI35P80217 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IFI35P80217 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFI35P80217 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.2■□□□□ 0.34
IFI35P80217 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IFI35P80217 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.2■□□□□ 0.34
IFI35P80217 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
IFI35P80217 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.2■□□□□ 0.34
IFI35P80217 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFI35P80217 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFI35P80217 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
IFI35P80217 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
IFI35P80217 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
IFI35P80217 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFI35P80217 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.19■□□□□ 0.34
IFI35P80217 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 AL353732.1-201ENST00000569618 1459 ntBASIC17.19■□□□□ 0.34
IFI35P80217 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.19■□□□□ 0.34
IFI35P80217 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.19■□□□□ 0.34
IFI35P80217 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 AC126177.1-201ENST00000547829 2218 ntBASIC17.19■□□□□ 0.34
IFI35P80217 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.19■□□□□ 0.34
IFI35P80217 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.19■□□□□ 0.34
IFI35P80217 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.19■□□□□ 0.34
IFI35P80217 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
IFI35P80217 HLA-J-202ENST00000469281 1241 ntBASIC17.19■□□□□ 0.34
IFI35P80217 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.19■□□□□ 0.34
IFI35P80217 UNC93B6-202ENST00000528242 690 ntBASIC17.19■□□□□ 0.34
IFI35P80217 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.19■□□□□ 0.34
IFI35P80217 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.19■□□□□ 0.34
IFI35P80217 AC005412.3-201ENST00000580309 715 ntBASIC17.19■□□□□ 0.34
IFI35P80217 AL121894.2-201ENST00000602977 491 ntBASIC17.19■□□□□ 0.34
IFI35P80217 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.19■□□□□ 0.34
IFI35P80217 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.19■□□□□ 0.34
IFI35P80217 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 AC010491.1-201ENST00000563101 2797 ntBASIC17.19■□□□□ 0.34
IFI35P80217 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 SLC22A20-204ENST00000530038 1673 ntBASIC17.19■□□□□ 0.34
IFI35P80217 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.19■□□□□ 0.34
IFI35P80217 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.19■□□□□ 0.34
IFI35P80217 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 AC006538.1-201ENST00000567905 1585 ntBASIC17.19■□□□□ 0.34
IFI35P80217 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
IFI35P80217 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFI35P80217 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
IFI35P80217 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
IFI35P80217 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFI35P80217 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IFI35P80217 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.18■□□□□ 0.34
IFI35P80217 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFI35P80217 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFI35P80217 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFI35P80217 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.18■□□□□ 0.34
IFI35P80217 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFI35P80217 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms