Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.21■□□□□ 0.67
IRX3P78415 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.21■□□□□ 0.67
IRX3P78415 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.21■□□□□ 0.67
IRX3P78415 AC108860.2-201ENST00000562760 2183 ntBASIC19.21■□□□□ 0.67
IRX3P78415 AL596325.1-201ENST00000563991 1082 ntBASIC19.21■□□□□ 0.67
IRX3P78415 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.21■□□□□ 0.67
IRX3P78415 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.21■□□□□ 0.67
IRX3P78415 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IRX3P78415 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.21■□□□□ 0.67
IRX3P78415 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.21■□□□□ 0.67
IRX3P78415 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.21■□□□□ 0.67
IRX3P78415 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IRX3P78415 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
IRX3P78415 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.21■□□□□ 0.67
IRX3P78415 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.2■□□□□ 0.66
IRX3P78415 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.2■□□□□ 0.66
IRX3P78415 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.2■□□□□ 0.66
IRX3P78415 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
IRX3P78415 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
IRX3P78415 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 MTND6P24-201ENST00000440466 518 ntBASIC19.2■□□□□ 0.66
IRX3P78415 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.2■□□□□ 0.66
IRX3P78415 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.2■□□□□ 0.66
IRX3P78415 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
IRX3P78415 FLJ38576-201ENST00000623820 2459 ntBASIC19.2■□□□□ 0.66
IRX3P78415 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.2■□□□□ 0.66
IRX3P78415 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.2■□□□□ 0.66
IRX3P78415 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.2■□□□□ 0.66
IRX3P78415 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.2■□□□□ 0.66
IRX3P78415 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.2■□□□□ 0.66
IRX3P78415 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
IRX3P78415 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC19.2■□□□□ 0.66
IRX3P78415 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.2■□□□□ 0.66
IRX3P78415 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.2■□□□□ 0.66
IRX3P78415 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 FOXO1B-201ENST00000504678 1527 ntBASIC19.2■□□□□ 0.66
IRX3P78415 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 AC008764.6-201ENST00000595909 2069 ntBASIC19.2■□□□□ 0.66
IRX3P78415 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IRX3P78415 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC19.19■□□□□ 0.66
IRX3P78415 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.19■□□□□ 0.66
IRX3P78415 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
IRX3P78415 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.19■□□□□ 0.66
IRX3P78415 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.19■□□□□ 0.66
IRX3P78415 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.19■□□□□ 0.66
IRX3P78415 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.19■□□□□ 0.66
IRX3P78415 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.19■□□□□ 0.66
IRX3P78415 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.19■□□□□ 0.66
IRX3P78415 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.19■□□□□ 0.66
IRX3P78415 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.19■□□□□ 0.66
IRX3P78415 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.19■□□□□ 0.66
IRX3P78415 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.19■□□□□ 0.66
IRX3P78415 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
IRX3P78415 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.19■□□□□ 0.66
IRX3P78415 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.19■□□□□ 0.66
IRX3P78415 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
IRX3P78415 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
IRX3P78415 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.19■□□□□ 0.66
IRX3P78415 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
IRX3P78415 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
IRX3P78415 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms