Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEP78395 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PRAMEP78395 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEP78395 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEP78395 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEP78395 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEP78395 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.71■□□□□ 0.27
PRAMEP78395 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEP78395 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEP78395 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PRAMEP78395 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEP78395 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEP78395 CRYGEP-201ENST00000412192 528 ntBASIC16.71■□□□□ 0.27
PRAMEP78395 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PRAMEP78395 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEP78395 FAM185BP-201ENST00000443595 716 ntBASIC16.71■□□□□ 0.27
PRAMEP78395 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEP78395 RNA5SP415-201ENST00000517246 115 ntBASIC16.71■□□□□ 0.27
PRAMEP78395 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PRAMEP78395 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
PRAMEP78395 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.71■□□□□ 0.27
PRAMEP78395 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.71■□□□□ 0.27
PRAMEP78395 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.71■□□□□ 0.27
PRAMEP78395 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.71■□□□□ 0.27
PRAMEP78395 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.71■□□□□ 0.27
PRAMEP78395 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEP78395 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEP78395 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PRAMEP78395 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEP78395 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
PRAMEP78395 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEP78395 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEP78395 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PRAMEP78395 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEP78395 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEP78395 AC005052.1-201ENST00000625181 2492 ntBASIC16.71■□□□□ 0.26
PRAMEP78395 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PRAMEP78395 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
PRAMEP78395 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PRAMEP78395 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PRAMEP78395 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
PRAMEP78395 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.26
PRAMEP78395 HLA-A-201ENST00000376802 1334 ntBASIC16.7■□□□□ 0.26
PRAMEP78395 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEP78395 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEP78395 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.7■□□□□ 0.26
PRAMEP78395 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.7■□□□□ 0.26
PRAMEP78395 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PRAMEP78395 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEP78395 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEP78395 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.7■□□□□ 0.26
PRAMEP78395 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEP78395 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEP78395 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.7■□□□□ 0.26
PRAMEP78395 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEP78395 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.7■□□□□ 0.26
PRAMEP78395 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEP78395 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.7■□□□□ 0.26
PRAMEP78395 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.7■□□□□ 0.26
PRAMEP78395 VN2R19P-201ENST00000442399 1052 ntBASIC16.7■□□□□ 0.26
PRAMEP78395 AC009947.1-201ENST00000444350 727 ntBASIC16.7■□□□□ 0.26
PRAMEP78395 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.7■□□□□ 0.26
PRAMEP78395 IGHV3-22-201ENST00000520721 359 ntBASIC16.7■□□□□ 0.26
PRAMEP78395 ACTL9-202ENST00000612068 1252 ntBASIC16.7■□□□□ 0.26
PRAMEP78395 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.7■□□□□ 0.26
PRAMEP78395 LINC00554-201ENST00000564841 3011 ntBASIC16.7■□□□□ 0.26
PRAMEP78395 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PRAMEP78395 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEP78395 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEP78395 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEP78395 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEP78395 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEP78395 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.7■□□□□ 0.26
PRAMEP78395 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.7■□□□□ 0.26
PRAMEP78395 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEP78395 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEP78395 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEP78395 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEP78395 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEP78395 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEP78395 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEP78395 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PRAMEP78395 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.69■□□□□ 0.26
PRAMEP78395 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEP78395 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.69■□□□□ 0.26
PRAMEP78395 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEP78395 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEP78395 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEP78395 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEP78395 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PRAMEP78395 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEP78395 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEP78395 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEP78395 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEP78395 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEP78395 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PRAMEP78395 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.69■□□□□ 0.26
PRAMEP78395 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEP78395 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.69■□□□□ 0.26
PRAMEP78395 AL513480.1-201ENST00000451731 511 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms