Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
MCCD1P59942 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
MCCD1P59942 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MCCD1P59942 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
MCCD1P59942 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
MCCD1P59942 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MCCD1P59942 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.56■□□□□ 0.4
MCCD1P59942 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MCCD1P59942 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MCCD1P59942 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
MCCD1P59942 HLA-H-201ENST00000383620 1096 ntBASIC17.56■□□□□ 0.4
MCCD1P59942 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
MCCD1P59942 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MCCD1P59942 AL627223.1-201ENST00000416693 442 ntBASIC17.56■□□□□ 0.4
MCCD1P59942 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.56■□□□□ 0.4
MCCD1P59942 RPS8P6-201ENST00000426177 609 ntBASIC17.56■□□□□ 0.4
MCCD1P59942 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.56■□□□□ 0.4
MCCD1P59942 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.56■□□□□ 0.4
MCCD1P59942 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.56■□□□□ 0.4
MCCD1P59942 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.56■□□□□ 0.4
MCCD1P59942 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.56■□□□□ 0.4
MCCD1P59942 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
MCCD1P59942 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MCCD1P59942 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.56■□□□□ 0.4
MCCD1P59942 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.56■□□□□ 0.4
MCCD1P59942 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MCCD1P59942 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MCCD1P59942 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MCCD1P59942 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MCCD1P59942 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
MCCD1P59942 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.56■□□□□ 0.4
MCCD1P59942 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MCCD1P59942 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
MCCD1P59942 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MCCD1P59942 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
MCCD1P59942 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.55■□□□□ 0.4
MCCD1P59942 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.55■□□□□ 0.4
MCCD1P59942 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MCCD1P59942 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.55■□□□□ 0.4
MCCD1P59942 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MCCD1P59942 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.55■□□□□ 0.4
MCCD1P59942 AC254562.1-201ENST00000417586 456 ntBASIC17.55■□□□□ 0.4
MCCD1P59942 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.55■□□□□ 0.4
MCCD1P59942 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.55■□□□□ 0.4
MCCD1P59942 TIMM8BP1-201ENST00000452384 211 ntBASIC17.55■□□□□ 0.4
MCCD1P59942 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MCCD1P59942 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.55■□□□□ 0.4
MCCD1P59942 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.55■□□□□ 0.4
MCCD1P59942 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MCCD1P59942 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.55■□□□□ 0.4
MCCD1P59942 AL512356.2-201ENST00000546955 174 ntBASIC17.55■□□□□ 0.4
MCCD1P59942 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.55■□□□□ 0.4
MCCD1P59942 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
MCCD1P59942 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MCCD1P59942 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
MCCD1P59942 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MCCD1P59942 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
MCCD1P59942 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.55■□□□□ 0.4
MCCD1P59942 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.55■□□□□ 0.4
MCCD1P59942 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MCCD1P59942 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MCCD1P59942 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MCCD1P59942 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
MCCD1P59942 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MCCD1P59942 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MCCD1P59942 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MCCD1P59942 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.54■□□□□ 0.4
MCCD1P59942 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MCCD1P59942 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MCCD1P59942 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MCCD1P59942 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MCCD1P59942 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MCCD1P59942 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
MCCD1P59942 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.54■□□□□ 0.4
MCCD1P59942 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.54■□□□□ 0.4
MCCD1P59942 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MCCD1P59942 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MCCD1P59942 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MCCD1P59942 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MCCD1P59942 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.54■□□□□ 0.4
MCCD1P59942 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.54■□□□□ 0.4
MCCD1P59942 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MCCD1P59942 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.54■□□□□ 0.4
MCCD1P59942 RARRES2P9-201ENST00000565168 469 ntBASIC17.54■□□□□ 0.4
MCCD1P59942 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.54■□□□□ 0.4
MCCD1P59942 MIR3687-2-201ENST00000577708 61 ntBASIC17.54■□□□□ 0.4
MCCD1P59942 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.54■□□□□ 0.4
MCCD1P59942 AC010327.4-202ENST00000591484 748 ntBASIC17.54■□□□□ 0.4
MCCD1P59942 MIR3687-1-201ENST00000614492 61 ntBASIC17.54■□□□□ 0.4
MCCD1P59942 AC009093.7-201ENST00000623853 1223 ntBASIC17.54■□□□□ 0.4
MCCD1P59942 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MCCD1P59942 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.54■□□□□ 0.4
MCCD1P59942 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MCCD1P59942 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MCCD1P59942 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.54■□□□□ 0.4
MCCD1P59942 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.54■□□□□ 0.4
MCCD1P59942 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
MCCD1P59942 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MCCD1P59942 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.54■□□□□ 0.4
MCCD1P59942 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms