Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB38P57729 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RAB38P57729 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB38P57729 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB38P57729 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB38P57729 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB38P57729 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB38P57729 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB38P57729 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RAB38P57729 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB38P57729 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RAB38P57729 AC005052.1-201ENST00000625181 2492 ntBASIC15.5■□□□□ 0.07
RAB38P57729 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB38P57729 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB38P57729 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RAB38P57729 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB38P57729 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB38P57729 AC084018.2-201ENST00000613093 2607 ntBASIC15.49■□□□□ 0.07
RAB38P57729 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB38P57729 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB38P57729 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB38P57729 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB38P57729 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB38P57729 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB38P57729 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB38P57729 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB38P57729 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB38P57729 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB38P57729 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RAB38P57729 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB38P57729 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB38P57729 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB38P57729 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.49■□□□□ 0.07
RAB38P57729 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB38P57729 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RAB38P57729 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.49■□□□□ 0.07
RAB38P57729 AC069335.1-201ENST00000489972 472 ntBASIC15.49■□□□□ 0.07
RAB38P57729 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.49■□□□□ 0.07
RAB38P57729 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.49■□□□□ 0.07
RAB38P57729 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.49■□□□□ 0.07
RAB38P57729 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.49■□□□□ 0.07
RAB38P57729 AP000842.3-202ENST00000569238 1080 ntBASIC15.49■□□□□ 0.07
RAB38P57729 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.49■□□□□ 0.07
RAB38P57729 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB38P57729 AC139530.3-201ENST00000620344 690 ntBASIC15.49■□□□□ 0.07
RAB38P57729 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB38P57729 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
RAB38P57729 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB38P57729 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RAB38P57729 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB38P57729 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB38P57729 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
RAB38P57729 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB38P57729 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB38P57729 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
RAB38P57729 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RAB38P57729 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.49■□□□□ 0.07
RAB38P57729 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RAB38P57729 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB38P57729 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.49■□□□□ 0.07
RAB38P57729 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB38P57729 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB38P57729 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB38P57729 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB38P57729 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB38P57729 U82695.1-201ENST00000635752 1889 ntBASIC15.48■□□□□ 0.07
RAB38P57729 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB38P57729 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
RAB38P57729 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB38P57729 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RAB38P57729 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RAB38P57729 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB38P57729 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB38P57729 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB38P57729 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB38P57729 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
RAB38P57729 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.48■□□□□ 0.07
RAB38P57729 CNN2P11-201ENST00000429351 262 ntBASIC15.48■□□□□ 0.07
RAB38P57729 AC005237.2-201ENST00000434368 219 ntBASIC15.48■□□□□ 0.07
RAB38P57729 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.48■□□□□ 0.07
RAB38P57729 DNAJB3-202ENST00000449667 1266 ntBASIC15.48■□□□□ 0.07
RAB38P57729 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.48■□□□□ 0.07
RAB38P57729 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RAB38P57729 SNHG9-202ENST00000564014 471 ntBASIC15.48■□□□□ 0.07
RAB38P57729 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.48■□□□□ 0.07
RAB38P57729 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.48■□□□□ 0.07
RAB38P57729 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RAB38P57729 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RAB38P57729 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB38P57729 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAB38P57729 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB38P57729 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB38P57729 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
RAB38P57729 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB38P57729 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.48■□□□□ 0.07
RAB38P57729 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.48■□□□□ 0.07
RAB38P57729 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAB38P57729 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
RAB38P57729 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.48■□□□□ 0.07
RAB38P57729 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms