Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.67■□□□□ 0.26
LIMK2P53671 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.67■□□□□ 0.26
LIMK2P53671 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
LIMK2P53671 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.67■□□□□ 0.26
LIMK2P53671 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LIMK2P53671 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
LIMK2P53671 SLC22A20-204ENST00000530038 1673 ntBASIC16.67■□□□□ 0.26
LIMK2P53671 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 AC211486.1-202ENST00000416371 468 ntBASIC16.67■□□□□ 0.26
LIMK2P53671 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.67■□□□□ 0.26
LIMK2P53671 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.67■□□□□ 0.26
LIMK2P53671 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.67■□□□□ 0.26
LIMK2P53671 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.67■□□□□ 0.26
LIMK2P53671 AC211476.1-201ENST00000503899 468 ntBASIC16.67■□□□□ 0.26
LIMK2P53671 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.67■□□□□ 0.26
LIMK2P53671 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.67■□□□□ 0.26
LIMK2P53671 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.67■□□□□ 0.26
LIMK2P53671 AC018845.2-201ENST00000568326 409 ntBASIC16.67■□□□□ 0.26
LIMK2P53671 AC005829.1-201ENST00000570002 483 ntBASIC16.67■□□□□ 0.26
LIMK2P53671 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.67■□□□□ 0.26
LIMK2P53671 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.67■□□□□ 0.26
LIMK2P53671 AC092865.6-201ENST00000642101 219 ntBASIC16.67■□□□□ 0.26
LIMK2P53671 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.67■□□□□ 0.26
LIMK2P53671 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.67■□□□□ 0.26
LIMK2P53671 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.67■□□□□ 0.26
LIMK2P53671 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
LIMK2P53671 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.67■□□□□ 0.26
LIMK2P53671 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LIMK2P53671 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LIMK2P53671 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.67■□□□□ 0.26
LIMK2P53671 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LIMK2P53671 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LIMK2P53671 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LIMK2P53671 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIMK2P53671 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.66■□□□□ 0.26
LIMK2P53671 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LIMK2P53671 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LIMK2P53671 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.66■□□□□ 0.26
LIMK2P53671 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIMK2P53671 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIMK2P53671 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.66■□□□□ 0.26
LIMK2P53671 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIMK2P53671 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.66■□□□□ 0.26
LIMK2P53671 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
LIMK2P53671 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LIMK2P53671 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.66■□□□□ 0.26
LIMK2P53671 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.66■□□□□ 0.26
LIMK2P53671 AC107918.2-201ENST00000530817 355 ntBASIC16.66■□□□□ 0.26
LIMK2P53671 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LIMK2P53671 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.66■□□□□ 0.26
LIMK2P53671 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.66■□□□□ 0.26
LIMK2P53671 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIMK2P53671 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
LIMK2P53671 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LIMK2P53671 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LIMK2P53671 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIMK2P53671 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIMK2P53671 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
LIMK2P53671 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIMK2P53671 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIMK2P53671 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIMK2P53671 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIMK2P53671 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LIMK2P53671 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LIMK2P53671 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LIMK2P53671 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIMK2P53671 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.65■□□□□ 0.26
LIMK2P53671 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LIMK2P53671 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LIMK2P53671 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIMK2P53671 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIMK2P53671 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
LIMK2P53671 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.65■□□□□ 0.26
LIMK2P53671 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIMK2P53671 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.65■□□□□ 0.26
LIMK2P53671 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LIMK2P53671 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIMK2P53671 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LIMK2P53671 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LIMK2P53671 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms