Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 PCDHB19P-201ENST00000570871 2371 ntBASIC14.72□□□□□ -0.05
CSNK1A1P48729 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1A1P48729 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CSNK1A1P48729 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
CSNK1A1P48729 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CSNK1A1P48729 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.71□□□□□ -0.05
CSNK1A1P48729 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
CSNK1A1P48729 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
CSNK1A1P48729 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 AL022342.1-201ENST00000400363 863 ntBASIC14.71□□□□□ -0.05
CSNK1A1P48729 MIR940-201ENST00000401276 94 ntBASIC14.71□□□□□ -0.05
CSNK1A1P48729 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.71□□□□□ -0.05
CSNK1A1P48729 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.71□□□□□ -0.05
CSNK1A1P48729 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.71□□□□□ -0.05
CSNK1A1P48729 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.71□□□□□ -0.05
CSNK1A1P48729 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.71□□□□□ -0.05
CSNK1A1P48729 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.71□□□□□ -0.05
CSNK1A1P48729 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
CSNK1A1P48729 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.71□□□□□ -0.05
CSNK1A1P48729 LINC01144-201ENST00000626198 1710 ntBASIC14.71□□□□□ -0.05
CSNK1A1P48729 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.71□□□□□ -0.05
CSNK1A1P48729 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CSNK1A1P48729 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSNK1A1P48729 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
CSNK1A1P48729 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms