Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC11.14□□□□□ -0.63
PCP4P48539 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
PCP4P48539 AC138749.1-201ENST00000567652 2472 ntBASIC11.14□□□□□ -0.63
PCP4P48539 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 DERL3-203ENST00000404056 3113 ntTSL 5 BASIC11.14□□□□□ -0.63
PCP4P48539 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC11.14□□□□□ -0.63
PCP4P48539 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
PCP4P48539 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC11.14□□□□□ -0.63
PCP4P48539 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.14□□□□□ -0.63
PCP4P48539 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
PCP4P48539 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.14□□□□□ -0.63
PCP4P48539 OR7E47P-201ENST00000546390 1422 ntBASIC11.14□□□□□ -0.63
PCP4P48539 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.14□□□□□ -0.63
PCP4P48539 NUMB-212ENST00000554546 3607 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC11.14□□□□□ -0.63
PCP4P48539 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
PCP4P48539 DNAJA4-201ENST00000343789 2961 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
PCP4P48539 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC11.14□□□□□ -0.63
PCP4P48539 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC11.14□□□□□ -0.63
PCP4P48539 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.14□□□□□ -0.63
PCP4P48539 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC11.14□□□□□ -0.63
PCP4P48539 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 LINC01588-203ENST00000529902 4279 ntTSL 2 BASIC11.14□□□□□ -0.63
PCP4P48539 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC11.14□□□□□ -0.63
PCP4P48539 DDO-201ENST00000368923 1953 ntTSL 2 BASIC11.14□□□□□ -0.63
PCP4P48539 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 LIMK2-202ENST00000333611 3462 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PCP4P48539 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
PCP4P48539 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 AC009084.2-201ENST00000624046 2810 ntBASIC11.13□□□□□ -0.63
PCP4P48539 RPS6KA1-220ENST00000531382 2359 ntTSL 2 BASIC11.13□□□□□ -0.63
PCP4P48539 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 AC092335.1-201ENST00000509037 2066 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
PCP4P48539 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC11.13□□□□□ -0.63
PCP4P48539 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC11.13□□□□□ -0.63
PCP4P48539 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
PCP4P48539 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC11.13□□□□□ -0.63
PCP4P48539 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
PCP4P48539 SLC45A3-201ENST00000367145 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
PCP4P48539 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC11.13□□□□□ -0.63
PCP4P48539 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
PCP4P48539 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 LINC01922-201ENST00000562582 719 ntBASIC11.13□□□□□ -0.63
PCP4P48539 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
PCP4P48539 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC11.13□□□□□ -0.63
PCP4P48539 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC11.13□□□□□ -0.63
PCP4P48539 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC11.13□□□□□ -0.63
PCP4P48539 GPAT2P1-201ENST00000444924 1672 ntBASIC11.13□□□□□ -0.63
PCP4P48539 AC116353.5-201ENST00000638148 1699 ntBASIC11.13□□□□□ -0.63
PCP4P48539 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
PCP4P48539 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
PCP4P48539 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
PCP4P48539 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC11.13□□□□□ -0.63
PCP4P48539 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
PCP4P48539 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms