Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.34
MMP13P45452 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.34
MMP13P45452 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
MMP13P45452 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
MMP13P45452 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.2■□□□□ 0.34
MMP13P45452 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MMP13P45452 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.2■□□□□ 0.34
MMP13P45452 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.2■□□□□ 0.34
MMP13P45452 AC144831.1-201ENST00000573312 2656 ntBASIC17.2■□□□□ 0.34
MMP13P45452 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.2■□□□□ 0.34
MMP13P45452 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.2■□□□□ 0.34
MMP13P45452 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
MMP13P45452 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
MMP13P45452 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MMP13P45452 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.2■□□□□ 0.34
MMP13P45452 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.2■□□□□ 0.34
MMP13P45452 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 SLC25A1P1-201ENST00000528351 927 ntBASIC17.2■□□□□ 0.34
MMP13P45452 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.2■□□□□ 0.34
MMP13P45452 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.2■□□□□ 0.34
MMP13P45452 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
MMP13P45452 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.2■□□□□ 0.34
MMP13P45452 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 LINC00895-201ENST00000629028 1637 ntBASIC17.2■□□□□ 0.34
MMP13P45452 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
MMP13P45452 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.2■□□□□ 0.34
MMP13P45452 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MMP13P45452 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.2■□□□□ 0.34
MMP13P45452 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MMP13P45452 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.2■□□□□ 0.34
MMP13P45452 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.2■□□□□ 0.34
MMP13P45452 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
MMP13P45452 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
MMP13P45452 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.2■□□□□ 0.34
MMP13P45452 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP13P45452 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MMP13P45452 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.19■□□□□ 0.34
MMP13P45452 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP13P45452 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.19■□□□□ 0.34
MMP13P45452 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MMP13P45452 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP13P45452 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP13P45452 ZNF259P1-201ENST00000407656 1365 ntBASIC17.19■□□□□ 0.34
MMP13P45452 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.19■□□□□ 0.34
MMP13P45452 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP13P45452 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP13P45452 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MMP13P45452 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP13P45452 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.19■□□□□ 0.34
MMP13P45452 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.19■□□□□ 0.34
MMP13P45452 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.19■□□□□ 0.34
MMP13P45452 AC091167.2-201ENST00000579581 588 ntBASIC17.19■□□□□ 0.34
MMP13P45452 AC005412.3-201ENST00000580309 715 ntBASIC17.19■□□□□ 0.34
MMP13P45452 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.19■□□□□ 0.34
MMP13P45452 MPDU1-223ENST00000582151 728 ntBASIC17.19■□□□□ 0.34
MMP13P45452 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.19■□□□□ 0.34
MMP13P45452 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.19■□□□□ 0.34
MMP13P45452 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP13P45452 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP13P45452 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.19■□□□□ 0.34
MMP13P45452 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.19■□□□□ 0.34
MMP13P45452 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP13P45452 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP13P45452 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.19■□□□□ 0.34
MMP13P45452 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.19■□□□□ 0.34
MMP13P45452 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP13P45452 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.19■□□□□ 0.34
MMP13P45452 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
MMP13P45452 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
MMP13P45452 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
MMP13P45452 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.19■□□□□ 0.34
MMP13P45452 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
MMP13P45452 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MMP13P45452 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms