Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
CXCL5P42830 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
CXCL5P42830 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
CXCL5P42830 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
CXCL5P42830 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CXCL5P42830 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
CXCL5P42830 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CXCL5P42830 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC11.21□□□□□ -0.62
CXCL5P42830 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
CXCL5P42830 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC11.21□□□□□ -0.62
CXCL5P42830 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC11.21□□□□□ -0.62
CXCL5P42830 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
CXCL5P42830 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CXCL5P42830 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
CXCL5P42830 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CXCL5P42830 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC11.2□□□□□ -0.62
CXCL5P42830 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC11.2□□□□□ -0.62
CXCL5P42830 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 AC104581.4-201ENST00000623126 3052 ntBASIC11.2□□□□□ -0.62
CXCL5P42830 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
CXCL5P42830 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
CXCL5P42830 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
CXCL5P42830 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC11.2□□□□□ -0.62
CXCL5P42830 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
CXCL5P42830 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
CXCL5P42830 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC11.2□□□□□ -0.62
CXCL5P42830 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC11.2□□□□□ -0.62
CXCL5P42830 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC11.2□□□□□ -0.62
CXCL5P42830 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 AL845331.1-201ENST00000424978 1190 ntBASIC11.2□□□□□ -0.62
CXCL5P42830 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC11.2□□□□□ -0.62
CXCL5P42830 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC11.2□□□□□ -0.62
CXCL5P42830 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.2□□□□□ -0.62
CXCL5P42830 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC11.2□□□□□ -0.62
CXCL5P42830 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC11.2□□□□□ -0.62
CXCL5P42830 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC11.2□□□□□ -0.62
CXCL5P42830 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC11.2□□□□□ -0.62
CXCL5P42830 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC11.2□□□□□ -0.62
CXCL5P42830 DUX4L17-201ENST00000557360 1267 ntBASIC11.2□□□□□ -0.62
CXCL5P42830 DET1-205ENST00000558413 583 ntTSL 4 BASIC11.2□□□□□ -0.62
CXCL5P42830 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC11.2□□□□□ -0.62
CXCL5P42830 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC11.2□□□□□ -0.62
CXCL5P42830 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC11.2□□□□□ -0.62
CXCL5P42830 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC11.2□□□□□ -0.62
CXCL5P42830 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC11.2□□□□□ -0.62
CXCL5P42830 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC11.2□□□□□ -0.62
CXCL5P42830 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC11.2□□□□□ -0.62
CXCL5P42830 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
CXCL5P42830 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC11.2□□□□□ -0.62
CXCL5P42830 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC11.2□□□□□ -0.62
CXCL5P42830 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
CXCL5P42830 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC11.2□□□□□ -0.62
CXCL5P42830 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 PMPCAP1-201ENST00000508114 1576 ntBASIC11.2□□□□□ -0.62
CXCL5P42830 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC11.2□□□□□ -0.62
CXCL5P42830 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CXCL5P42830 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC11.2□□□□□ -0.62
CXCL5P42830 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CXCL5P42830 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CXCL5P42830 TP73-AS1-210ENST00000637775 1455 ntBASIC11.19□□□□□ -0.62
CXCL5P42830 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CXCL5P42830 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CXCL5P42830 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CXCL5P42830 ALOX12P2-203ENST00000570921 1945 ntBASIC11.19□□□□□ -0.62
CXCL5P42830 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CXCL5P42830 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CXCL5P42830 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CXCL5P42830 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CXCL5P42830 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CXCL5P42830 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CXCL5P42830 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms