Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SNCAP37840 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.67□□□□□ -0.22
SNCAP37840 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.67□□□□□ -0.22
SNCAP37840 DUX4L26-201ENST00000489078 1255 ntBASIC13.67□□□□□ -0.22
SNCAP37840 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.67□□□□□ -0.22
SNCAP37840 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.67□□□□□ -0.22
SNCAP37840 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.67□□□□□ -0.22
SNCAP37840 AL136038.3-201ENST00000561909 1096 ntBASIC13.67□□□□□ -0.22
SNCAP37840 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.67□□□□□ -0.22
SNCAP37840 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.67□□□□□ -0.22
SNCAP37840 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.67□□□□□ -0.22
SNCAP37840 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SNCAP37840 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.67□□□□□ -0.22
SNCAP37840 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.67□□□□□ -0.22
SNCAP37840 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SNCAP37840 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.67□□□□□ -0.22
SNCAP37840 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.67□□□□□ -0.22
SNCAP37840 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.67□□□□□ -0.22
SNCAP37840 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNCAP37840 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.66□□□□□ -0.22
SNCAP37840 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SNCAP37840 TUBB8P12-201ENST00000308911 1335 ntBASIC13.66□□□□□ -0.22
SNCAP37840 TUBB7P-202ENST00000428444 1305 ntBASIC13.66□□□□□ -0.22
SNCAP37840 TUBB8P7-204ENST00000567960 1332 ntBASIC13.66□□□□□ -0.22
SNCAP37840 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNCAP37840 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNCAP37840 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNCAP37840 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.66□□□□□ -0.22
SNCAP37840 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNCAP37840 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNCAP37840 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.66□□□□□ -0.22
SNCAP37840 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNCAP37840 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SNCAP37840 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNCAP37840 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
SNCAP37840 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SNCAP37840 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNCAP37840 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNCAP37840 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
SNCAP37840 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
SNCAP37840 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SNCAP37840 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNCAP37840 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.66□□□□□ -0.22
SNCAP37840 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNCAP37840 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.66□□□□□ -0.22
SNCAP37840 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.66□□□□□ -0.22
SNCAP37840 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SNCAP37840 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.66□□□□□ -0.22
SNCAP37840 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SNCAP37840 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.66□□□□□ -0.22
SNCAP37840 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.66□□□□□ -0.22
SNCAP37840 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.66□□□□□ -0.22
SNCAP37840 AL121672.3-201ENST00000608644 468 ntBASIC13.66□□□□□ -0.22
SNCAP37840 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.66□□□□□ -0.22
SNCAP37840 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.66□□□□□ -0.22
SNCAP37840 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
SNCAP37840 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNCAP37840 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SNCAP37840 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNCAP37840 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNCAP37840 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNCAP37840 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNCAP37840 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SNCAP37840 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.66□□□□□ -0.22
SNCAP37840 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SNCAP37840 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.65□□□□□ -0.22
SNCAP37840 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
SNCAP37840 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SNCAP37840 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.65□□□□□ -0.22
SNCAP37840 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SNCAP37840 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.65□□□□□ -0.22
SNCAP37840 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SNCAP37840 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SNCAP37840 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms