Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CTGFP29279 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CTGFP29279 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
CTGFP29279 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CTGFP29279 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CTGFP29279 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.31■□□□□ 0.52
CTGFP29279 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.31■□□□□ 0.52
CTGFP29279 PARP8-206ENST00000503665 572 ntTSL 4 BASIC18.31■□□□□ 0.52
CTGFP29279 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC18.31■□□□□ 0.52
CTGFP29279 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.31■□□□□ 0.52
CTGFP29279 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.31■□□□□ 0.52
CTGFP29279 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.31■□□□□ 0.52
CTGFP29279 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.31■□□□□ 0.52
CTGFP29279 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.31■□□□□ 0.52
CTGFP29279 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.31■□□□□ 0.52
CTGFP29279 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.31■□□□□ 0.52
CTGFP29279 CLUHP6-201ENST00000580789 941 ntBASIC18.31■□□□□ 0.52
CTGFP29279 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.31■□□□□ 0.52
CTGFP29279 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.31■□□□□ 0.52
CTGFP29279 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CTGFP29279 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.31■□□□□ 0.52
CTGFP29279 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
CTGFP29279 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.31■□□□□ 0.52
CTGFP29279 U82695.1-201ENST00000635752 1889 ntBASIC18.31■□□□□ 0.52
CTGFP29279 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTGFP29279 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTGFP29279 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTGFP29279 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CTGFP29279 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CTGFP29279 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTGFP29279 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.3■□□□□ 0.52
CTGFP29279 AZGP1P1-201ENST00000411909 902 ntBASIC18.3■□□□□ 0.52
CTGFP29279 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CTGFP29279 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.3■□□□□ 0.52
CTGFP29279 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.3■□□□□ 0.52
CTGFP29279 AC010328.2-201ENST00000597698 1111 ntBASIC18.3■□□□□ 0.52
CTGFP29279 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.3■□□□□ 0.52
CTGFP29279 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.3■□□□□ 0.52
CTGFP29279 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTGFP29279 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CTGFP29279 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.3■□□□□ 0.52
CTGFP29279 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTGFP29279 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CTGFP29279 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.3■□□□□ 0.52
CTGFP29279 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.3■□□□□ 0.52
CTGFP29279 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTGFP29279 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTGFP29279 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.29■□□□□ 0.52
CTGFP29279 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTGFP29279 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTGFP29279 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTGFP29279 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTGFP29279 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTGFP29279 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.29■□□□□ 0.52
CTGFP29279 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CTGFP29279 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTGFP29279 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTGFP29279 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CTGFP29279 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
CTGFP29279 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTGFP29279 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.29■□□□□ 0.52
CTGFP29279 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTGFP29279 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.29■□□□□ 0.52
CTGFP29279 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.29■□□□□ 0.52
CTGFP29279 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTGFP29279 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.29■□□□□ 0.52
CTGFP29279 AC106760.1-201ENST00000508690 800 ntBASIC18.29■□□□□ 0.52
CTGFP29279 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTGFP29279 PTP4A1P2-201ENST00000546033 454 ntBASIC18.29■□□□□ 0.52
CTGFP29279 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.29■□□□□ 0.52
CTGFP29279 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.29■□□□□ 0.52
CTGFP29279 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.29■□□□□ 0.52
CTGFP29279 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CTGFP29279 MIR4321-201ENST00000592276 80 ntBASIC18.29■□□□□ 0.52
CTGFP29279 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CTGFP29279 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.29■□□□□ 0.52
CTGFP29279 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CTGFP29279 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTGFP29279 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms