Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RXRBP28702 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RXRBP28702 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
RXRBP28702 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RXRBP28702 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RXRBP28702 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RXRBP28702 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
RXRBP28702 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RXRBP28702 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RXRBP28702 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RXRBP28702 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RXRBP28702 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RXRBP28702 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RXRBP28702 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RXRBP28702 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC21.2■□□□□ 0.98
RXRBP28702 AL008707.1-201ENST00000422498 534 ntBASIC21.2■□□□□ 0.98
RXRBP28702 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RXRBP28702 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RXRBP28702 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC21.2■□□□□ 0.98
RXRBP28702 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC21.2■□□□□ 0.98
RXRBP28702 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RXRBP28702 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
RXRBP28702 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RXRBP28702 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RXRBP28702 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RXRBP28702 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC21.19■□□□□ 0.98
RXRBP28702 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RXRBP28702 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.19■□□□□ 0.98
RXRBP28702 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.19■□□□□ 0.98
RXRBP28702 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RXRBP28702 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RXRBP28702 GUK1-206ENST00000366723 845 ntTSL 5 BASIC21.19■□□□□ 0.98
RXRBP28702 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RXRBP28702 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RXRBP28702 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RXRBP28702 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC21.19■□□□□ 0.98
RXRBP28702 MSRA-203ENST00000441698 788 ntTSL 2 BASIC21.19■□□□□ 0.98
RXRBP28702 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RXRBP28702 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC21.19■□□□□ 0.98
RXRBP28702 CFL1-206ENST00000527344 962 ntTSL 2 BASIC21.19■□□□□ 0.98
RXRBP28702 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RXRBP28702 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RXRBP28702 RN7SL774P-201ENST00000577467 290 ntBASIC21.19■□□□□ 0.98
RXRBP28702 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC21.19■□□□□ 0.98
RXRBP28702 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC21.19■□□□□ 0.98
RXRBP28702 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.19■□□□□ 0.98
RXRBP28702 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RXRBP28702 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RXRBP28702 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RXRBP28702 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RXRBP28702 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.19■□□□□ 0.98
RXRBP28702 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RXRBP28702 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RXRBP28702 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC21.18■□□□□ 0.98
RXRBP28702 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RXRBP28702 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RXRBP28702 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RXRBP28702 AL136982.4-201ENST00000437689 1740 ntBASIC21.18■□□□□ 0.98
RXRBP28702 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RXRBP28702 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RXRBP28702 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RXRBP28702 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.18■□□□□ 0.98
RXRBP28702 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RXRBP28702 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RXRBP28702 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RXRBP28702 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RXRBP28702 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RXRBP28702 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC21.18■□□□□ 0.98
RXRBP28702 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC21.18■□□□□ 0.98
RXRBP28702 AC044849.1-201ENST00000519737 1188 ntBASIC21.18■□□□□ 0.98
RXRBP28702 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC21.18■□□□□ 0.98
RXRBP28702 AC135983.4-201ENST00000564116 1262 ntBASIC21.18■□□□□ 0.98
RXRBP28702 AC009084.3-201ENST00000623356 437 ntBASIC21.18■□□□□ 0.98
RXRBP28702 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC21.18■□□□□ 0.98
RXRBP28702 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RXRBP28702 TUBBP5-203ENST00000508529 1334 ntBASIC21.18■□□□□ 0.98
RXRBP28702 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.18■□□□□ 0.98
RXRBP28702 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RXRBP28702 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC21.18■□□□□ 0.98
RXRBP28702 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
RXRBP28702 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RXRBP28702 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RXRBP28702 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RXRBP28702 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RXRBP28702 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RXRBP28702 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RXRBP28702 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RXRBP28702 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RXRBP28702 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC21.17■□□□□ 0.98
RXRBP28702 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RXRBP28702 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
RXRBP28702 AC007274.2-201ENST00000421675 662 ntBASIC21.17■□□□□ 0.98
RXRBP28702 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC21.17■□□□□ 0.98
RXRBP28702 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC21.17■□□□□ 0.98
RXRBP28702 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RXRBP28702 COX6A1P2-201ENST00000620597 330 ntBASIC21.17■□□□□ 0.98
RXRBP28702 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC21.17■□□□□ 0.98
RXRBP28702 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RXRBP28702 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RXRBP28702 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms