Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CHMLP26374 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMLP26374 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMLP26374 MED15P5-201ENST00000423150 992 ntBASIC19.88■□□□□ 0.77
CHMLP26374 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.88■□□□□ 0.77
CHMLP26374 AL591424.1-201ENST00000442569 1213 ntBASIC19.88■□□□□ 0.77
CHMLP26374 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMLP26374 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.88■□□□□ 0.77
CHMLP26374 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CHMLP26374 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.88■□□□□ 0.77
CHMLP26374 AC068137.2-201ENST00000605408 478 ntBASIC19.88■□□□□ 0.77
CHMLP26374 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMLP26374 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.88■□□□□ 0.77
CHMLP26374 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CHMLP26374 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMLP26374 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMLP26374 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMLP26374 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMLP26374 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMLP26374 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMLP26374 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMLP26374 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMLP26374 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMLP26374 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMLP26374 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMLP26374 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMLP26374 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMLP26374 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMLP26374 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMLP26374 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMLP26374 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMLP26374 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMLP26374 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMLP26374 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CHMLP26374 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMLP26374 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMLP26374 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMLP26374 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMLP26374 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMLP26374 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMLP26374 KRT18P34-201ENST00000488218 1270 ntBASIC19.87■□□□□ 0.77
CHMLP26374 RNA5SP416-201ENST00000516838 111 ntBASIC19.87■□□□□ 0.77
CHMLP26374 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.87■□□□□ 0.77
CHMLP26374 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMLP26374 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMLP26374 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CHMLP26374 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMLP26374 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.87■□□□□ 0.77
CHMLP26374 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMLP26374 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMLP26374 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMLP26374 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMLP26374 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMLP26374 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHMLP26374 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMLP26374 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMLP26374 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMLP26374 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMLP26374 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHMLP26374 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMLP26374 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMLP26374 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CHMLP26374 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHMLP26374 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHMLP26374 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMLP26374 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
CHMLP26374 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHMLP26374 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMLP26374 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHMLP26374 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
CHMLP26374 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.86■□□□□ 0.77
CHMLP26374 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.86■□□□□ 0.77
CHMLP26374 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMLP26374 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.86■□□□□ 0.77
CHMLP26374 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CHMLP26374 AC099522.2-201ENST00000607001 744 ntBASIC19.86■□□□□ 0.77
CHMLP26374 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.86■□□□□ 0.77
CHMLP26374 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.86■□□□□ 0.77
CHMLP26374 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHMLP26374 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHMLP26374 CICP6-201ENST00000457191 2729 ntBASIC19.86■□□□□ 0.77
CHMLP26374 U82695.1-201ENST00000635752 1889 ntBASIC19.86■□□□□ 0.77
CHMLP26374 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMLP26374 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMLP26374 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMLP26374 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
CHMLP26374 AC073439.1-201ENST00000624121 1774 ntBASIC19.85■□□□□ 0.77
CHMLP26374 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMLP26374 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.85■□□□□ 0.77
CHMLP26374 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMLP26374 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CHMLP26374 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CHMLP26374 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMLP26374 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
CHMLP26374 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMLP26374 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CHMLP26374 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMLP26374 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.85■□□□□ 0.77
CHMLP26374 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMLP26374 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms