Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP8P22894 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.34■□□□□ 0.37
MMP8P22894 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
MMP8P22894 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP8P22894 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.34■□□□□ 0.37
MMP8P22894 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP8P22894 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.34■□□□□ 0.37
MMP8P22894 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.34■□□□□ 0.37
MMP8P22894 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
MMP8P22894 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
MMP8P22894 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
MMP8P22894 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.34■□□□□ 0.37
MMP8P22894 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
MMP8P22894 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MMP8P22894 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MMP8P22894 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MMP8P22894 PGAM5P1-201ENST00000518923 814 ntBASIC17.34■□□□□ 0.37
MMP8P22894 AC112191.1-201ENST00000523689 701 ntBASIC17.34■□□□□ 0.37
MMP8P22894 KRT18P58-201ENST00000527480 1120 ntBASIC17.34■□□□□ 0.37
MMP8P22894 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
MMP8P22894 AC073439.1-201ENST00000624121 1774 ntBASIC17.34■□□□□ 0.37
MMP8P22894 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP8P22894 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP8P22894 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
MMP8P22894 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MMP8P22894 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.33■□□□□ 0.37
MMP8P22894 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
MMP8P22894 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MMP8P22894 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.33■□□□□ 0.37
MMP8P22894 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.33■□□□□ 0.37
MMP8P22894 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MMP8P22894 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MMP8P22894 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MMP8P22894 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MMP8P22894 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.33■□□□□ 0.37
MMP8P22894 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
MMP8P22894 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.33■□□□□ 0.37
MMP8P22894 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.33■□□□□ 0.36
MMP8P22894 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
MMP8P22894 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP8P22894 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
MMP8P22894 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP8P22894 AC023274.1-201ENST00000418278 595 ntBASIC17.33■□□□□ 0.36
MMP8P22894 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.33■□□□□ 0.36
MMP8P22894 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.33■□□□□ 0.36
MMP8P22894 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP8P22894 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
MMP8P22894 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.33■□□□□ 0.36
MMP8P22894 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP8P22894 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
MMP8P22894 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP8P22894 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP8P22894 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MMP8P22894 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP8P22894 AL603832.2-201ENST00000566195 2125 ntBASIC17.33■□□□□ 0.36
MMP8P22894 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP8P22894 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP8P22894 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MMP8P22894 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP8P22894 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.33■□□□□ 0.36
MMP8P22894 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP8P22894 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MMP8P22894 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.32■□□□□ 0.36
MMP8P22894 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
MMP8P22894 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
MMP8P22894 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MMP8P22894 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.32■□□□□ 0.36
MMP8P22894 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP8P22894 MIR940-201ENST00000401276 94 ntBASIC17.32■□□□□ 0.36
MMP8P22894 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.32■□□□□ 0.36
MMP8P22894 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.32■□□□□ 0.36
MMP8P22894 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.32■□□□□ 0.36
MMP8P22894 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.32■□□□□ 0.36
MMP8P22894 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.32■□□□□ 0.36
MMP8P22894 AC040169.1-201ENST00000565382 521 ntBASIC17.32■□□□□ 0.36
MMP8P22894 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.32■□□□□ 0.36
MMP8P22894 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.32■□□□□ 0.36
MMP8P22894 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
MMP8P22894 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP8P22894 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MMP8P22894 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.32■□□□□ 0.36
MMP8P22894 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP8P22894 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
MMP8P22894 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.32■□□□□ 0.36
MMP8P22894 AC024909.3-201ENST00000611513 2257 ntBASIC17.32■□□□□ 0.36
MMP8P22894 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
MMP8P22894 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MMP8P22894 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MMP8P22894 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MMP8P22894 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.31■□□□□ 0.36
MMP8P22894 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.31■□□□□ 0.36
MMP8P22894 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.31■□□□□ 0.36
MMP8P22894 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
MMP8P22894 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP8P22894 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP8P22894 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP8P22894 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MMP8P22894 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MMP8P22894 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MMP8P22894 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms