Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
CDH3P22223 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH3P22223 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.25■□□□□ 0.19
CDH3P22223 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.25■□□□□ 0.19
CDH3P22223 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.25■□□□□ 0.19
CDH3P22223 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH3P22223 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH3P22223 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDH3P22223 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDH3P22223 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 ELL2P1-201ENST00000413990 1906 ntBASIC16.25■□□□□ 0.19
CDH3P22223 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH3P22223 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDH3P22223 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH3P22223 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH3P22223 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH3P22223 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH3P22223 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH3P22223 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDH3P22223 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH3P22223 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CDH3P22223 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 AC092919.2-201ENST00000623631 1645 ntBASIC16.24■□□□□ 0.19
CDH3P22223 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.24■□□□□ 0.19
CDH3P22223 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDH3P22223 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH3P22223 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CDH3P22223 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.24■□□□□ 0.19
CDH3P22223 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.24■□□□□ 0.19
CDH3P22223 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.24■□□□□ 0.19
CDH3P22223 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 YBX1P5-201ENST00000509441 847 ntBASIC16.24■□□□□ 0.19
CDH3P22223 AC112191.1-201ENST00000523689 701 ntBASIC16.24■□□□□ 0.19
CDH3P22223 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH3P22223 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH3P22223 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH3P22223 AC124947.2-201ENST00000547118 1133 ntBASIC16.24■□□□□ 0.19
CDH3P22223 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.24■□□□□ 0.19
CDH3P22223 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.24■□□□□ 0.19
CDH3P22223 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CDH3P22223 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CDH3P22223 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH3P22223 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH3P22223 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH3P22223 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDH3P22223 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CDH3P22223 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH3P22223 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH3P22223 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDH3P22223 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CDH3P22223 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH3P22223 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH3P22223 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH3P22223 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH3P22223 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH3P22223 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH3P22223 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH3P22223 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH3P22223 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH3P22223 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDH3P22223 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CDH3P22223 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH3P22223 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH3P22223 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH3P22223 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH3P22223 KRT8P49-201ENST00000604166 1432 ntBASIC16.23■□□□□ 0.19
CDH3P22223 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH3P22223 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH3P22223 HCG4-201ENST00000418983 998 ntBASIC16.23■□□□□ 0.19
CDH3P22223 ACTG1P14-201ENST00000446382 1122 ntBASIC16.23■□□□□ 0.19
CDH3P22223 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.23■□□□□ 0.19
CDH3P22223 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.23■□□□□ 0.19
CDH3P22223 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH3P22223 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH3P22223 AP002472.1-201ENST00000577490 586 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms