Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
KRT4P19013 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT4P19013 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT4P19013 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
KRT4P19013 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.63■□□□□ 0.25
KRT4P19013 FLJ16779-201ENST00000612722 7638 ntBASIC16.63■□□□□ 0.25
KRT4P19013 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.63■□□□□ 0.25
KRT4P19013 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
KRT4P19013 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.63■□□□□ 0.25
KRT4P19013 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.63■□□□□ 0.25
KRT4P19013 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
KRT4P19013 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.63■□□□□ 0.25
KRT4P19013 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT4P19013 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
KRT4P19013 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.63■□□□□ 0.25
KRT4P19013 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT4P19013 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
KRT4P19013 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
KRT4P19013 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
KRT4P19013 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
KRT4P19013 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT4P19013 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
KRT4P19013 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT4P19013 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT4P19013 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT4P19013 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT4P19013 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT4P19013 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
KRT4P19013 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KRT4P19013 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT4P19013 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT4P19013 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT4P19013 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT4P19013 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT4P19013 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT4P19013 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT4P19013 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
KRT4P19013 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT4P19013 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT4P19013 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT4P19013 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT4P19013 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT4P19013 AL031133.1-201ENST00000406807 723 ntBASIC16.62■□□□□ 0.25
KRT4P19013 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT4P19013 AP002383.4-201ENST00000442518 975 ntBASIC16.62■□□□□ 0.25
KRT4P19013 LINC00265-3P-201ENST00000447588 903 ntBASIC16.62■□□□□ 0.25
KRT4P19013 PRYP5-201ENST00000451909 266 ntBASIC16.62■□□□□ 0.25
KRT4P19013 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT4P19013 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.62■□□□□ 0.25
KRT4P19013 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.62■□□□□ 0.25
KRT4P19013 AP002414.4-201ENST00000589764 1148 ntBASIC16.62■□□□□ 0.25
KRT4P19013 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KRT4P19013 AC064862.7-201ENST00000604520 867 ntBASIC16.62■□□□□ 0.25
KRT4P19013 LINC01023-201ENST00000606054 436 ntBASIC16.62■□□□□ 0.25
KRT4P19013 AL121956.5-201ENST00000625261 221 ntBASIC16.62■□□□□ 0.25
KRT4P19013 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.62■□□□□ 0.25
KRT4P19013 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT4P19013 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
KRT4P19013 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT4P19013 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KRT4P19013 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT4P19013 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KRT4P19013 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
KRT4P19013 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT4P19013 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.62■□□□□ 0.25
KRT4P19013 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
KRT4P19013 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KRT4P19013 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT4P19013 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
KRT4P19013 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.62■□□□□ 0.25
KRT4P19013 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT4P19013 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
KRT4P19013 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms