Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.34■□□□□ 0.37
PDGFRAP16234 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
PDGFRAP16234 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFRAP16234 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.34■□□□□ 0.37
PDGFRAP16234 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFRAP16234 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PDGFRAP16234 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.34■□□□□ 0.37
PDGFRAP16234 AC055717.3-201ENST00000622967 595 ntBASIC17.34■□□□□ 0.37
PDGFRAP16234 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.34■□□□□ 0.37
PDGFRAP16234 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PDGFRAP16234 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFRAP16234 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PDGFRAP16234 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PDGFRAP16234 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PDGFRAP16234 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFRAP16234 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFRAP16234 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PDGFRAP16234 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.33■□□□□ 0.37
PDGFRAP16234 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDGFRAP16234 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDGFRAP16234 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PDGFRAP16234 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.33■□□□□ 0.37
PDGFRAP16234 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDGFRAP16234 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDGFRAP16234 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDGFRAP16234 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDGFRAP16234 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDGFRAP16234 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.33■□□□□ 0.37
PDGFRAP16234 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PDGFRAP16234 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.33■□□□□ 0.37
PDGFRAP16234 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
PDGFRAP16234 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFRAP16234 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PDGFRAP16234 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
PDGFRAP16234 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.33■□□□□ 0.36
PDGFRAP16234 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFRAP16234 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.33■□□□□ 0.36
PDGFRAP16234 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.33■□□□□ 0.36
PDGFRAP16234 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFRAP16234 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFRAP16234 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFRAP16234 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.33■□□□□ 0.36
PDGFRAP16234 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.33■□□□□ 0.36
PDGFRAP16234 AP002472.1-201ENST00000577490 586 ntBASIC17.33■□□□□ 0.36
PDGFRAP16234 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFRAP16234 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFRAP16234 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.33■□□□□ 0.36
PDGFRAP16234 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFRAP16234 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFRAP16234 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFRAP16234 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFRAP16234 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFRAP16234 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFRAP16234 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PDGFRAP16234 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFRAP16234 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFRAP16234 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFRAP16234 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.33■□□□□ 0.36
PDGFRAP16234 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFRAP16234 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.33■□□□□ 0.36
PDGFRAP16234 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.33■□□□□ 0.36
PDGFRAP16234 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFRAP16234 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.32■□□□□ 0.36
PDGFRAP16234 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PDGFRAP16234 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFRAP16234 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
PDGFRAP16234 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PDGFRAP16234 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.32■□□□□ 0.36
PDGFRAP16234 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PDGFRAP16234 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.32■□□□□ 0.36
PDGFRAP16234 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFRAP16234 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFRAP16234 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFRAP16234 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.32■□□□□ 0.36
PDGFRAP16234 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFRAP16234 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFRAP16234 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PDGFRAP16234 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
PDGFRAP16234 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFRAP16234 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFRAP16234 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFRAP16234 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFRAP16234 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.32■□□□□ 0.36
PDGFRAP16234 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFRAP16234 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFRAP16234 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PDGFRAP16234 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.32■□□□□ 0.36
PDGFRAP16234 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.32■□□□□ 0.36
PDGFRAP16234 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFRAP16234 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFRAP16234 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
PDGFRAP16234 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFRAP16234 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFRAP16234 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.32■□□□□ 0.36
PDGFRAP16234 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFRAP16234 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PDGFRAP16234 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.32■□□□□ 0.36
PDGFRAP16234 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PDGFRAP16234 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PDGFRAP16234 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms