| MUC1 | P15941 | LRP8-202 | ENST00000347547 | 2382 nt | TSL 1 (best) BASIC | 14.22 | □□□□□ -0.13 | | |
| MUC1 | P15941 | TGIF1-201 | ENST00000330513 | 1980 nt | TSL 1 (best) BASIC | 14.22 | □□□□□ -0.13 | | |
| MUC1 | P15941 | WASHC2C-209 | ENST00000540872 | 4519 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.22 | □□□□□ -0.13 | | |
| MUC1 | P15941 | RAD51D-201 | ENST00000335858 | 1353 nt | TSL 1 (best) BASIC | 14.22 | □□□□□ -0.13 | | |
| MUC1 | P15941 | ARHGEF4-205 | ENST00000409359 | 5489 nt | TSL 5 BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | ZNF140-210 | ENST00000544426 | 2340 nt | TSL 2 BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | MON2-203 | ENST00000546600 | 6130 nt | TSL 1 (best) BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | HLA-F-218 | ENST00000376861 | 1544 nt | APPRIS ALT2 BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | KPNA2-202 | ENST00000537025 | 2456 nt | APPRIS P1 TSL 1 (best) BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | ANTXR1-201 | ENST00000303714 | 5859 nt | APPRIS P1 TSL 1 (best) BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | MRI1-202 | ENST00000319545 | 3027 nt | TSL 1 (best) BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | EVPLL-201 | ENST00000399134 | 2095 nt | APPRIS P1 TSL 1 (best) BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | GSPT2-201 | ENST00000340438 | 2802 nt | APPRIS P1 BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | KLHDC8A-201 | ENST00000367155 | 2928 nt | APPRIS P1 TSL 2 BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | ISCA2-201 | ENST00000298818 | 851 nt | TSL 5 BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | TMEM128-202 | ENST00000382753 | 1221 nt | APPRIS P1 TSL 1 (best) BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | CLDN14-205 | ENST00000399139 | 1231 nt | APPRIS P1 TSL 1 (best) BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | HCG15-203 | ENST00000438190 | 1032 nt | TSL 3 BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | DYNC1LI2-202 | ENST00000440564 | 1145 nt | TSL 2 BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | VN2R19P-201 | ENST00000442399 | 1052 nt | BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | FTCD-AS1-201 | ENST00000446649 | 500 nt | TSL 2 BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | SLC25A6P2-201 | ENST00000497974 | 877 nt | BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | PLA2G12A-202 | ENST00000502283 | 1189 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | MRNIP-205 | ENST00000518235 | 1244 nt | APPRIS ALT2 TSL 2 BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | FCHSD1-204 | ENST00000519800 | 802 nt | TSL 2 BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | CD63-210 | ENST00000550776 | 870 nt | TSL 5 BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | AC091167.2-201 | ENST00000579581 | 588 nt | BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | AC005412.3-201 | ENST00000580309 | 715 nt | BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | AC055811.1-201 | ENST00000584203 | 1231 nt | TSL 5 BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | AC008992.1-201 | ENST00000591132 | 446 nt | TSL 2 BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | AC011530.1-201 | ENST00000593999 | 558 nt | TSL 2 BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | AL512343.2-201 | ENST00000609423 | 490 nt | TSL 2 BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | CCL3-204 | ENST00000613922 | 778 nt | APPRIS P1 TSL 1 (best) BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | SARAF-201 | ENST00000256255 | 2154 nt | APPRIS P1 TSL 1 (best) BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | CPEB2-AS1-201 | ENST00000500394 | 1630 nt | TSL 1 (best) BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | GALNT18-201 | ENST00000227756 | 2504 nt | APPRIS P1 TSL 1 (best) BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | MCF2L-232 | ENST00000535094 | 3752 nt | APPRIS ALT2 TSL 2 BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | RABGAP1L-201 | ENST00000251507 | 2899 nt | APPRIS P1 TSL 2 BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | ANTXRL-206 | ENST00000622632 | 1964 nt | APPRIS ALT2 TSL 5 BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | ADARB1-204 | ENST00000389863 | 3563 nt | TSL 1 (best) BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | AC144831.1-201 | ENST00000573312 | 2656 nt | BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | AC104109.2-201 | ENST00000602919 | 1418 nt | BASIC | 14.21 | □□□□□ -0.13 | | |
| MUC1 | P15941 | ROBO3-201 | ENST00000397801 | 4569 nt | APPRIS P2 TSL 1 (best) BASIC | 14.21 | □□□□□ -0.14 | | |
| MUC1 | P15941 | ROBO3-220 | ENST00000538940 | 4551 nt | APPRIS ALT2 TSL 5 BASIC | 14.21 | □□□□□ -0.14 | | |
| MUC1 | P15941 | DMAP1-201 | ENST00000315913 | 1552 nt | APPRIS P1 TSL 1 (best) BASIC | 14.21 | □□□□□ -0.14 | | |
| MUC1 | P15941 | KCNK7-203 | ENST00000394216 | 1563 nt | TSL 1 (best) BASIC | 14.21 | □□□□□ -0.14 | | |
| MUC1 | P15941 | INPP5J-204 | ENST00000402238 | 1564 nt | TSL 2 BASIC | 14.21 | □□□□□ -0.14 | | |
| MUC1 | P15941 | VWA2-203 | ENST00000603594 | 2600 nt | TSL 2 BASIC | 14.21 | □□□□□ -0.14 | | |
| MUC1 | P15941 | SYNDIG1L-202 | ENST00000554823 | 2420 nt | APPRIS P1 TSL 3 BASIC | 14.21 | □□□□□ -0.14 | | |
| MUC1 | P15941 | ABTB1-206 | ENST00000468137 | 2065 nt | TSL 1 (best) BASIC | 14.21 | □□□□□ -0.14 | | |
| MUC1 | P15941 | HOXC6-201 | ENST00000243108 | 1733 nt | APPRIS P1 TSL 1 (best) BASIC | 14.21 | □□□□□ -0.14 | | |
| MUC1 | P15941 | CCDC71L-202 | ENST00000523505 | 4232 nt | APPRIS P2 BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | ARHGEF4-206 | ENST00000428230 | 2172 nt | TSL 5 BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | AHRR-201 | ENST00000316418 | 5661 nt | APPRIS P3 TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | KIF25-201 | ENST00000351261 | 1326 nt | TSL 5 BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | SARDH-202 | ENST00000371867 | 1326 nt | TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | SRCIN1-215 | ENST00000621492 | 4644 nt | APPRIS ALT2 TSL 5 BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | JPH4-202 | ENST00000397118 | 4386 nt | APPRIS P2 TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | SLC2A13-202 | ENST00000380858 | 3082 nt | TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | RBPJ-204 | ENST00000348160 | 1752 nt | APPRIS ALT1 TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | RDH13-223 | ENST00000610356 | 1931 nt | TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | VCAN-204 | ENST00000502527 | 2087 nt | APPRIS ALT1 TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | MFSD13A-202 | ENST00000369931 | 823 nt | TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | FNDC11-202 | ENST00000370098 | 1112 nt | APPRIS P1 TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | TCEAL2-202 | ENST00000372780 | 1100 nt | APPRIS P1 TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | FAM41C-202 | ENST00000432963 | 504 nt | TSL 2 BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | BAALC-AS2-201 | ENST00000436771 | 496 nt | TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | MIR503HG-203 | ENST00000441492 | 649 nt | TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | SUMO2P17-202 | ENST00000508743 | 738 nt | TSL 3 BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | CMC2-212 | ENST00000565650 | 671 nt | APPRIS P1 TSL 2 BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | OAZ1-202 | ENST00000582888 | 969 nt | APPRIS ALT1 TSL 5 BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | SELENOM-210 | ENST00000611680 | 689 nt | APPRIS ALT2 TSL 5 BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | BSG-214 | ENST00000614867 | 960 nt | TSL 3 BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | HMGN3-203 | ENST00000620514 | 1010 nt | TSL 3 BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | REXO1L3P-201 | ENST00000622202 | 1288 nt | BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | MYCBPAP-201 | ENST00000323776 | 3186 nt | APPRIS P2 TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | TJP1-212 | ENST00000614355 | 6977 nt | APPRIS ALT2 TSL 5 BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | PAPOLB-201 | ENST00000404991 | 4262 nt | APPRIS P1 BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | RNASE4-203 | ENST00000555835 | 2520 nt | APPRIS P1 TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | ZNF367-201 | ENST00000375256 | 3646 nt | APPRIS P1 TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | AC092171.3-201 | ENST00000610122 | 2651 nt | BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | LMNB2-201 | ENST00000325327 | 4671 nt | APPRIS P1 TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | AC073324.2-201 | ENST00000626532 | 2941 nt | TSL 4 BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | ROCK2-209 | ENST00000616279 | 6401 nt | TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | LILRA6-201 | ENST00000245621 | 1395 nt | APPRIS ALT2 TSL 5 BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | SRSF2-205 | ENST00000508921 | 1390 nt | TSL 2 BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | BVES-202 | ENST00000336775 | 1663 nt | APPRIS P1 TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | TCP1-203 | ENST00000420894 | 1671 nt | TSL 5 BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | HOXC5-201 | ENST00000312492 | 1805 nt | APPRIS P1 TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | RTL6-201 | ENST00000341255 | 5495 nt | APPRIS P1 TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | BCRP2-201 | ENST00000398241 | 1842 nt | TSL 2 BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | NBPF11-205 | ENST00000615281 | 5494 nt | APPRIS P2 TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | ELF2-207 | ENST00000510408 | 1965 nt | TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | CR392000.2-201 | ENST00000640235 | 1994 nt | TSL 2 BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | F3-201 | ENST00000334047 | 2287 nt | APPRIS P1 TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | CDSN-202 | ENST00000376288 | 2552 nt | APPRIS P1 TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | PPP2R5D-202 | ENST00000394110 | 2894 nt | TSL 1 (best) BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | AC092384.3-202 | ENST00000564646 | 2873 nt | BASIC | 14.2 | □□□□□ -0.14 | | |
| MUC1 | P15941 | PDS5A-201 | ENST00000303538 | 7176 nt | APPRIS P1 TSL 1 (best) BASIC | 14.19 | □□□□□ -0.14 | | |
| MUC1 | P15941 | ZNRF3-201 | ENST00000402174 | 2667 nt | APPRIS P3 TSL 2 BASIC | 14.19 | □□□□□ -0.14 | | |