Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DOBP13765 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DOBP13765 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 AL513190.1-201ENST00000621254 727 ntBASIC14.82□□□□□ -0.04
HLA-DOBP13765 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DOBP13765 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DOBP13765 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DOBP13765 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DOBP13765 AC092919.2-201ENST00000623631 1645 ntBASIC14.81□□□□□ -0.04
HLA-DOBP13765 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DOBP13765 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DOBP13765 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DOBP13765 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DOBP13765 AL391005.1-201ENST00000623953 2435 ntBASIC14.81□□□□□ -0.04
HLA-DOBP13765 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
HLA-DOBP13765 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DOBP13765 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DOBP13765 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DOBP13765 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HLA-DOBP13765 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DOBP13765 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DOBP13765 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DOBP13765 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DOBP13765 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
HLA-DOBP13765 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.81□□□□□ -0.04
HLA-DOBP13765 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DOBP13765 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
HLA-DOBP13765 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.81□□□□□ -0.04
HLA-DOBP13765 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DOBP13765 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DOBP13765 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.81□□□□□ -0.04
HLA-DOBP13765 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DOBP13765 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DOBP13765 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DOBP13765 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DOBP13765 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HLA-DOBP13765 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DOBP13765 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DOBP13765 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DOBP13765 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.81□□□□□ -0.04
HLA-DOBP13765 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DOBP13765 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms