Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.37■□□□□ 0.37
RARAP10276 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RARAP10276 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RARAP10276 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 AC012569.1-201ENST00000591191 1524 ntBASIC17.37■□□□□ 0.37
RARAP10276 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARAP10276 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARAP10276 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARAP10276 AC023824.1-201ENST00000562945 2975 ntBASIC17.36■□□□□ 0.37
RARAP10276 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RARAP10276 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARAP10276 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
RARAP10276 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARAP10276 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RARAP10276 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RARAP10276 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARAP10276 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.36■□□□□ 0.37
RARAP10276 IGLL3P-201ENST00000412472 434 ntBASIC17.36■□□□□ 0.37
RARAP10276 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.36■□□□□ 0.37
RARAP10276 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.36■□□□□ 0.37
RARAP10276 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RARAP10276 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.36■□□□□ 0.37
RARAP10276 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
RARAP10276 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.36■□□□□ 0.37
RARAP10276 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.36■□□□□ 0.37
RARAP10276 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.36■□□□□ 0.37
RARAP10276 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.36■□□□□ 0.37
RARAP10276 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARAP10276 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARAP10276 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.36■□□□□ 0.37
RARAP10276 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.36■□□□□ 0.37
RARAP10276 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
RARAP10276 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.36■□□□□ 0.37
RARAP10276 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RARAP10276 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARAP10276 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.36■□□□□ 0.37
RARAP10276 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RARAP10276 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARAP10276 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.36■□□□□ 0.37
RARAP10276 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARAP10276 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RARAP10276 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARAP10276 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RARAP10276 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RARAP10276 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RARAP10276 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.35■□□□□ 0.37
RARAP10276 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RARAP10276 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.35■□□□□ 0.37
RARAP10276 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RARAP10276 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RARAP10276 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.35■□□□□ 0.37
RARAP10276 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RARAP10276 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RARAP10276 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.35■□□□□ 0.37
RARAP10276 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.35■□□□□ 0.37
RARAP10276 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RARAP10276 MIR4515-201ENST00000584082 81 ntBASIC17.35■□□□□ 0.37
RARAP10276 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.35■□□□□ 0.37
RARAP10276 AL121894.2-201ENST00000602977 491 ntBASIC17.35■□□□□ 0.37
RARAP10276 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.35■□□□□ 0.37
RARAP10276 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RARAP10276 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RARAP10276 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.35■□□□□ 0.37
RARAP10276 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RARAP10276 AC010491.1-201ENST00000563101 2797 ntBASIC17.35■□□□□ 0.37
RARAP10276 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RARAP10276 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RARAP10276 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.35■□□□□ 0.37
RARAP10276 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.35■□□□□ 0.37
RARAP10276 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RARAP10276 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RARAP10276 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.35■□□□□ 0.37
RARAP10276 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
RARAP10276 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.34■□□□□ 0.37
RARAP10276 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RARAP10276 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RARAP10276 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RARAP10276 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RARAP10276 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
RARAP10276 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RARAP10276 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RARAP10276 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RARAP10276 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RARAP10276 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RARAP10276 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.34■□□□□ 0.37
RARAP10276 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RARAP10276 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.34■□□□□ 0.37
RARAP10276 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.34■□□□□ 0.37
RARAP10276 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.34■□□□□ 0.37
RARAP10276 CRYGEP-201ENST00000412192 528 ntBASIC17.34■□□□□ 0.37
RARAP10276 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.34■□□□□ 0.37
RARAP10276 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.34■□□□□ 0.37
RARAP10276 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RARAP10276 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms