Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AL031731.1-201ENST00000642131 2094 ntBASIC15.08■□□□□ 0
P04436 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.08■□□□□ 0
P04436 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
P04436 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
P04436 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
P04436 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
P04436 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
P04436 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.08■□□□□ 0
P04436 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
P04436 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
P04436 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.07■□□□□ 0
P04436 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.07■□□□□ 0
P04436 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
P04436 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
P04436 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
P04436 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.07■□□□□ 0
P04436 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
P04436 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P04436 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.07■□□□□ 0
P04436 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.07■□□□□ 0
P04436 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.07■□□□□ 0
P04436 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.07■□□□□ 0
P04436 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.07■□□□□ 0
P04436 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P04436 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.07■□□□□ 0
P04436 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.07■□□□□ 0
P04436 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
P04436 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.07■□□□□ 0
P04436 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.07■□□□□ 0
P04436 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.07■□□□□ 0
P04436 MIR6080-201ENST00000617359 66 ntBASIC15.07■□□□□ 0
P04436 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
P04436 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.07■□□□□ 0
P04436 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
P04436 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.07■□□□□ 0
P04436 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.07■□□□□ 0
P04436 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.07■□□□□ 0
P04436 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P04436 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.07■□□□□ 0
P04436 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
P04436 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
P04436 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
P04436 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
P04436 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.07■□□□□ 0
P04436 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
P04436 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
P04436 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
P04436 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.07■□□□□ 0
P04436 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P04436 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
P04436 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
P04436 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.07■□□□□ 0
P04436 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.07■□□□□ 0
P04436 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P04436 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.07■□□□□ 0
P04436 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
P04436 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.06■□□□□ 0
P04436 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
P04436 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
P04436 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
P04436 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
P04436 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
P04436 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
P04436 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.06■□□□□ 0
P04436 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
P04436 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.06■□□□□ 0
P04436 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.06■□□□□ 0
P04436 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
P04436 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
P04436 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
P04436 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
P04436 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.06■□□□□ 0
P04436 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.06■□□□□ 0
P04436 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
P04436 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.06■□□□□ 0
P04436 AC142381.1-201ENST00000426099 345 ntBASIC15.06■□□□□ 0
P04436 SPDYE14P-201ENST00000442619 822 ntBASIC15.06■□□□□ 0
P04436 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.06■□□□□ 0
P04436 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.06■□□□□ 0
P04436 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.06■□□□□ 0
P04436 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.06■□□□□ 0
P04436 AC015911.4-201ENST00000588022 1070 ntBASIC15.06■□□□□ 0
P04436 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
P04436 SPTSSB-204ENST00000617024 1292 ntBASIC15.06■□□□□ 0
P04436 AC093512.1-201ENST00000617969 520 ntBASIC15.06■□□□□ 0
P04436 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.06■□□□□ 0
P04436 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.06■□□□□ 0
P04436 TUBB3P1-201ENST00000405796 1332 ntBASIC15.06■□□□□ 0
P04436 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
P04436 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
P04436 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
P04436 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
P04436 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
P04436 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
P04436 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.06■□□□□ 0
P04436 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.06■□□□□ 0
P04436 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
P04436 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
P04436 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.06■□□□□ 0
P04436 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms