Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.61■□□□□ 0.41
TIMP1P01033 AC007551.1-201ENST00000457394 519 ntBASIC17.61■□□□□ 0.41
TIMP1P01033 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.61■□□□□ 0.41
TIMP1P01033 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.61■□□□□ 0.41
TIMP1P01033 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.61■□□□□ 0.41
TIMP1P01033 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.61■□□□□ 0.41
TIMP1P01033 AL359711.2-201ENST00000563105 872 ntBASIC17.61■□□□□ 0.41
TIMP1P01033 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.61■□□□□ 0.41
TIMP1P01033 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.61■□□□□ 0.41
TIMP1P01033 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TIMP1P01033 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TIMP1P01033 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.6■□□□□ 0.41
TIMP1P01033 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TIMP1P01033 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TIMP1P01033 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.6■□□□□ 0.41
TIMP1P01033 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TIMP1P01033 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TIMP1P01033 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.6■□□□□ 0.41
TIMP1P01033 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TIMP1P01033 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.6■□□□□ 0.41
TIMP1P01033 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.6■□□□□ 0.41
TIMP1P01033 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.6■□□□□ 0.41
TIMP1P01033 AP002490.2-201ENST00000524791 560 ntBASIC17.6■□□□□ 0.41
TIMP1P01033 AP001889.1-201ENST00000525414 633 ntBASIC17.6■□□□□ 0.41
TIMP1P01033 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.6■□□□□ 0.41
TIMP1P01033 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.6■□□□□ 0.41
TIMP1P01033 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.6■□□□□ 0.41
TIMP1P01033 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 BRI3BPP1-201ENST00000594224 787 ntBASIC17.6■□□□□ 0.41
TIMP1P01033 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.6■□□□□ 0.41
TIMP1P01033 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.6■□□□□ 0.41
TIMP1P01033 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TIMP1P01033 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.6■□□□□ 0.41
TIMP1P01033 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.6■□□□□ 0.41
TIMP1P01033 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.6■□□□□ 0.41
TIMP1P01033 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TIMP1P01033 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TIMP1P01033 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 AL031731.1-201ENST00000642131 2094 ntBASIC17.6■□□□□ 0.41
TIMP1P01033 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.6■□□□□ 0.41
TIMP1P01033 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TIMP1P01033 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TIMP1P01033 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TIMP1P01033 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.59■□□□□ 0.41
TIMP1P01033 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMP1P01033 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.59■□□□□ 0.41
TIMP1P01033 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.59■□□□□ 0.41
TIMP1P01033 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMP1P01033 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMP1P01033 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.59■□□□□ 0.41
TIMP1P01033 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TIMP1P01033 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMP1P01033 AC008764.6-201ENST00000595909 2069 ntBASIC17.59■□□□□ 0.41
TIMP1P01033 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.59■□□□□ 0.41
TIMP1P01033 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMP1P01033 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMP1P01033 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.59■□□□□ 0.41
TIMP1P01033 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TIMP1P01033 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMP1P01033 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMP1P01033 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.59■□□□□ 0.41
TIMP1P01033 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TIMP1P01033 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TIMP1P01033 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.59■□□□□ 0.41
TIMP1P01033 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TIMP1P01033 MIR1247-201ENST00000408206 136 ntBASIC17.59■□□□□ 0.41
TIMP1P01033 GPAA1P2-201ENST00000417923 928 ntBASIC17.59■□□□□ 0.41
TIMP1P01033 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TIMP1P01033 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.59■□□□□ 0.41
TIMP1P01033 AC068587.3-201ENST00000526613 355 ntBASIC17.59■□□□□ 0.41
TIMP1P01033 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.59■□□□□ 0.41
TIMP1P01033 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.59■□□□□ 0.41
TIMP1P01033 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TIMP1P01033 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.59■□□□□ 0.41
TIMP1P01033 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms