Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.22□□□□□ -0.29
NDUFA3O95167 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.22□□□□□ -0.29
NDUFA3O95167 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA3O95167 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NDUFA3O95167 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA3O95167 MIR574-201ENST00000385209 96 ntBASIC13.22□□□□□ -0.29
NDUFA3O95167 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA3O95167 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.22□□□□□ -0.29
NDUFA3O95167 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.22□□□□□ -0.29
NDUFA3O95167 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA3O95167 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA3O95167 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA3O95167 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.22□□□□□ -0.29
NDUFA3O95167 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NDUFA3O95167 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.22□□□□□ -0.29
NDUFA3O95167 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.22□□□□□ -0.29
NDUFA3O95167 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA3O95167 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA3O95167 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA3O95167 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA3O95167 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA3O95167 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NDUFA3O95167 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
NDUFA3O95167 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA3O95167 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
NDUFA3O95167 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA3O95167 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA3O95167 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA3O95167 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.22□□□□□ -0.29
NDUFA3O95167 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
NDUFA3O95167 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.22□□□□□ -0.29
NDUFA3O95167 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NDUFA3O95167 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.22□□□□□ -0.29
NDUFA3O95167 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.22□□□□□ -0.29
NDUFA3O95167 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
NDUFA3O95167 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NDUFA3O95167 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.21□□□□□ -0.29
NDUFA3O95167 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NDUFA3O95167 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA3O95167 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.21□□□□□ -0.29
NDUFA3O95167 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
NDUFA3O95167 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA3O95167 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
NDUFA3O95167 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA3O95167 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.21□□□□□ -0.29
NDUFA3O95167 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA3O95167 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA3O95167 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA3O95167 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA3O95167 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA3O95167 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA3O95167 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.21□□□□□ -0.29
NDUFA3O95167 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NDUFA3O95167 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA3O95167 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA3O95167 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
NDUFA3O95167 AC002056.1-201ENST00000395613 760 ntBASIC13.21□□□□□ -0.29
NDUFA3O95167 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.21□□□□□ -0.29
NDUFA3O95167 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.21□□□□□ -0.29
NDUFA3O95167 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.21□□□□□ -0.29
NDUFA3O95167 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.21□□□□□ -0.29
NDUFA3O95167 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.21□□□□□ -0.29
NDUFA3O95167 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
NDUFA3O95167 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.21□□□□□ -0.29
NDUFA3O95167 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.21□□□□□ -0.29
NDUFA3O95167 AL161645.1-201ENST00000622716 1255 ntBASIC13.21□□□□□ -0.29
NDUFA3O95167 AC092865.6-201ENST00000642101 219 ntBASIC13.21□□□□□ -0.29
NDUFA3O95167 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA3O95167 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.21□□□□□ -0.29
NDUFA3O95167 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.21□□□□□ -0.29
NDUFA3O95167 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.21□□□□□ -0.29
NDUFA3O95167 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
NDUFA3O95167 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
NDUFA3O95167 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.21□□□□□ -0.29
NDUFA3O95167 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFA3O95167 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFA3O95167 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFA3O95167 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFA3O95167 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFA3O95167 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFA3O95167 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFA3O95167 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFA3O95167 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
NDUFA3O95167 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFA3O95167 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFA3O95167 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.21□□□□□ -0.3
NDUFA3O95167 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.21□□□□□ -0.3
NDUFA3O95167 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA3O95167 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA3O95167 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.2□□□□□ -0.3
NDUFA3O95167 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA3O95167 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA3O95167 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA3O95167 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA3O95167 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA3O95167 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.2□□□□□ -0.3
NDUFA3O95167 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA3O95167 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.2□□□□□ -0.3
NDUFA3O95167 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA3O95167 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms