Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC7.23□□□□□ -1.25
USH2AO75445 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC7.23□□□□□ -1.25
USH2AO75445 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC7.23□□□□□ -1.25
USH2AO75445 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC7.23□□□□□ -1.25
USH2AO75445 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
USH2AO75445 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 AHCYP2-201ENST00000430630 1300 ntBASIC7.23□□□□□ -1.25
USH2AO75445 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC7.23□□□□□ -1.25
USH2AO75445 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC7.23□□□□□ -1.25
USH2AO75445 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
USH2AO75445 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC7.23□□□□□ -1.25
USH2AO75445 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC7.23□□□□□ -1.25
USH2AO75445 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
USH2AO75445 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC7.23□□□□□ -1.25
USH2AO75445 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
USH2AO75445 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC7.23□□□□□ -1.25
USH2AO75445 STARD13-205ENST00000439831 945 ntTSL 2 BASIC7.23□□□□□ -1.25
USH2AO75445 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 ATP6V0CP2-201ENST00000469409 207 ntBASIC7.23□□□□□ -1.25
USH2AO75445 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
USH2AO75445 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC7.23□□□□□ -1.25
USH2AO75445 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
USH2AO75445 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC7.23□□□□□ -1.25
USH2AO75445 NKG7-204ENST00000595217 816 ntTSL 2 BASIC7.23□□□□□ -1.25
USH2AO75445 KLK3-207ENST00000595952 969 ntTSL 3 BASIC7.23□□□□□ -1.25
USH2AO75445 AC138951.2-201ENST00000623455 1161 ntBASIC7.23□□□□□ -1.25
USH2AO75445 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC7.22□□□□□ -1.25
USH2AO75445 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC7.22□□□□□ -1.25
USH2AO75445 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC7.22□□□□□ -1.25
USH2AO75445 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC7.22□□□□□ -1.25
USH2AO75445 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC7.22□□□□□ -1.25
USH2AO75445 RPL13P2-201ENST00000440687 659 ntBASIC7.22□□□□□ -1.25
USH2AO75445 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC7.22□□□□□ -1.25
USH2AO75445 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC7.22□□□□□ -1.25
USH2AO75445 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC7.22□□□□□ -1.25
USH2AO75445 AC135983.4-201ENST00000564116 1262 ntBASIC7.22□□□□□ -1.25
USH2AO75445 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC7.22□□□□□ -1.25
USH2AO75445 GMFG-209ENST00000600322 622 ntTSL 5 BASIC7.22□□□□□ -1.25
USH2AO75445 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC7.22□□□□□ -1.25
USH2AO75445 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC7.22□□□□□ -1.25
USH2AO75445 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
USH2AO75445 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC7.22□□□□□ -1.25
USH2AO75445 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC7.22□□□□□ -1.25
USH2AO75445 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 AZGP1P1-201ENST00000411909 902 ntBASIC7.22□□□□□ -1.25
USH2AO75445 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC7.22□□□□□ -1.25
USH2AO75445 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC7.22□□□□□ -1.25
USH2AO75445 RNF41-210ENST00000552244 716 ntTSL 3 BASIC7.22□□□□□ -1.25
USH2AO75445 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC7.22□□□□□ -1.25
USH2AO75445 BRI3BPP1-201ENST00000594224 787 ntBASIC7.22□□□□□ -1.25
USH2AO75445 AP003392.6-201ENST00000607709 325 ntBASIC7.22□□□□□ -1.25
USH2AO75445 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 AC015818.8-201ENST00000587907 1519 ntBASIC7.22□□□□□ -1.25
USH2AO75445 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC7.22□□□□□ -1.25
USH2AO75445 POR-209ENST00000439269 1858 ntTSL 2 BASIC7.22□□□□□ -1.25
USH2AO75445 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC7.22□□□□□ -1.25
USH2AO75445 MSRA-203ENST00000441698 788 ntTSL 2 BASIC7.22□□□□□ -1.25
USH2AO75445 AC012441.1-201ENST00000446669 685 ntBASIC7.22□□□□□ -1.25
USH2AO75445 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
USH2AO75445 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC7.22□□□□□ -1.25
USH2AO75445 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC7.22□□□□□ -1.25
USH2AO75445 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC7.22□□□□□ -1.25
USH2AO75445 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms