Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 FAM197Y3-203ENST00000618346 717 ntBASIC17.18■□□□□ 0.34
LRCH4O75427 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.18■□□□□ 0.34
LRCH4O75427 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.18■□□□□ 0.34
LRCH4O75427 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.18■□□□□ 0.34
LRCH4O75427 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.18■□□□□ 0.34
LRCH4O75427 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
LRCH4O75427 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRCH4O75427 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LRCH4O75427 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH4O75427 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH4O75427 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LRCH4O75427 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.17■□□□□ 0.34
LRCH4O75427 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LRCH4O75427 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH4O75427 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH4O75427 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH4O75427 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH4O75427 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.17■□□□□ 0.34
LRCH4O75427 AC024909.3-201ENST00000611513 2257 ntBASIC17.17■□□□□ 0.34
LRCH4O75427 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LRCH4O75427 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH4O75427 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.17■□□□□ 0.34
LRCH4O75427 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.17■□□□□ 0.34
LRCH4O75427 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.17■□□□□ 0.34
LRCH4O75427 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.17■□□□□ 0.34
LRCH4O75427 AC074386.1-202ENST00000463561 864 ntBASIC17.17■□□□□ 0.34
LRCH4O75427 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LRCH4O75427 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.17■□□□□ 0.34
LRCH4O75427 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.17■□□□□ 0.34
LRCH4O75427 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH4O75427 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH4O75427 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.17■□□□□ 0.34
LRCH4O75427 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
LRCH4O75427 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.17■□□□□ 0.34
LRCH4O75427 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH4O75427 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH4O75427 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.17■□□□□ 0.34
LRCH4O75427 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.17■□□□□ 0.34
LRCH4O75427 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH4O75427 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.17■□□□□ 0.34
LRCH4O75427 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH4O75427 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRCH4O75427 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.16■□□□□ 0.34
LRCH4O75427 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH4O75427 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH4O75427 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.16■□□□□ 0.34
LRCH4O75427 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH4O75427 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH4O75427 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LRCH4O75427 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.16■□□□□ 0.34
LRCH4O75427 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH4O75427 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.16■□□□□ 0.34
LRCH4O75427 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LRCH4O75427 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRCH4O75427 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH4O75427 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH4O75427 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.16■□□□□ 0.34
LRCH4O75427 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.16■□□□□ 0.34
LRCH4O75427 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.16■□□□□ 0.34
LRCH4O75427 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.16■□□□□ 0.34
LRCH4O75427 AL603832.2-201ENST00000566195 2125 ntBASIC17.16■□□□□ 0.34
LRCH4O75427 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.16■□□□□ 0.34
LRCH4O75427 AP002472.1-201ENST00000577490 586 ntBASIC17.16■□□□□ 0.34
LRCH4O75427 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.16■□□□□ 0.34
LRCH4O75427 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH4O75427 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH4O75427 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH4O75427 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH4O75427 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LRCH4O75427 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.16■□□□□ 0.34
LRCH4O75427 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.16■□□□□ 0.34
LRCH4O75427 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH4O75427 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.16■□□□□ 0.34
LRCH4O75427 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.16■□□□□ 0.34
LRCH4O75427 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH4O75427 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.16■□□□□ 0.34
LRCH4O75427 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRCH4O75427 AL365203.3-201ENST00000609742 2057 ntBASIC17.16■□□□□ 0.34
LRCH4O75427 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
LRCH4O75427 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.15■□□□□ 0.34
LRCH4O75427 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH4O75427 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH4O75427 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH4O75427 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH4O75427 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LRCH4O75427 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH4O75427 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH4O75427 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.15■□□□□ 0.34
LRCH4O75427 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH4O75427 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
LRCH4O75427 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRCH4O75427 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LRCH4O75427 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.15■□□□□ 0.34
LRCH4O75427 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms