Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF253O75346 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF253O75346 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF253O75346 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
ZNF253O75346 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZNF253O75346 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF253O75346 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF253O75346 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ZNF253O75346 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF253O75346 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF253O75346 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ZNF253O75346 AL020989.1-201ENST00000422979 469 ntBASIC12.94□□□□□ -0.34
ZNF253O75346 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 BX276092.5-203ENST00000456199 560 ntBASIC12.94□□□□□ -0.34
ZNF253O75346 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.94□□□□□ -0.34
ZNF253O75346 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.94□□□□□ -0.34
ZNF253O75346 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.94□□□□□ -0.34
ZNF253O75346 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.94□□□□□ -0.34
ZNF253O75346 Z69720.1-201ENST00000601483 472 ntBASIC12.94□□□□□ -0.34
ZNF253O75346 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.94□□□□□ -0.34
ZNF253O75346 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF253O75346 AL139011.1-202ENST00000642063 584 ntBASIC12.94□□□□□ -0.34
ZNF253O75346 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF253O75346 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ZNF253O75346 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
ZNF253O75346 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF253O75346 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF253O75346 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.94□□□□□ -0.34
ZNF253O75346 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
ZNF253O75346 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ZNF253O75346 INTS4P1-201ENST00000438455 1935 ntBASIC12.94□□□□□ -0.34
ZNF253O75346 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.94□□□□□ -0.34
ZNF253O75346 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
ZNF253O75346 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.93□□□□□ -0.34
ZNF253O75346 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
ZNF253O75346 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF253O75346 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.93□□□□□ -0.34
ZNF253O75346 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF253O75346 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
ZNF253O75346 AL391256.1-201ENST00000443260 1855 ntBASIC12.93□□□□□ -0.34
ZNF253O75346 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF253O75346 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.93□□□□□ -0.34
ZNF253O75346 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.93□□□□□ -0.34
ZNF253O75346 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF253O75346 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.93□□□□□ -0.34
ZNF253O75346 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ZNF253O75346 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
ZNF253O75346 AL645728.1-201ENST00000366221 2101 ntBASIC12.93□□□□□ -0.34
ZNF253O75346 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.93□□□□□ -0.34
ZNF253O75346 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF253O75346 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.93□□□□□ -0.34
ZNF253O75346 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.93□□□□□ -0.34
ZNF253O75346 DUX4L26-201ENST00000489078 1255 ntBASIC12.93□□□□□ -0.34
ZNF253O75346 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
ZNF253O75346 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC12.93□□□□□ -0.34
ZNF253O75346 DUX4L17-201ENST00000557360 1267 ntBASIC12.93□□□□□ -0.34
ZNF253O75346 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF253O75346 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.93□□□□□ -0.34
ZNF253O75346 NTF6B-201ENST00000591913 560 ntBASIC12.93□□□□□ -0.34
ZNF253O75346 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.93□□□□□ -0.34
ZNF253O75346 AL121956.5-201ENST00000625261 221 ntBASIC12.93□□□□□ -0.34
ZNF253O75346 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12.93□□□□□ -0.34
ZNF253O75346 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.93□□□□□ -0.34
ZNF253O75346 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.93□□□□□ -0.34
ZNF253O75346 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF253O75346 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF253O75346 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF253O75346 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF253O75346 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.93□□□□□ -0.34
ZNF253O75346 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ZNF253O75346 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.93□□□□□ -0.34
ZNF253O75346 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF253O75346 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF253O75346 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF253O75346 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ZNF253O75346 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ZNF253O75346 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms