Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PRICKLE3O43900 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PRICKLE3O43900 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRICKLE3O43900 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRICKLE3O43900 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRICKLE3O43900 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRICKLE3O43900 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PRICKLE3O43900 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRICKLE3O43900 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRICKLE3O43900 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRICKLE3O43900 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.83■□□□□ 0.13
PRICKLE3O43900 AC005622.1-201ENST00000636801 1703 ntBASIC15.83■□□□□ 0.13
PRICKLE3O43900 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.83■□□□□ 0.12
PRICKLE3O43900 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRICKLE3O43900 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PRICKLE3O43900 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRICKLE3O43900 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRICKLE3O43900 AC005052.1-201ENST00000625181 2492 ntBASIC15.83■□□□□ 0.12
PRICKLE3O43900 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
PRICKLE3O43900 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRICKLE3O43900 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PRICKLE3O43900 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.83■□□□□ 0.12
PRICKLE3O43900 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRICKLE3O43900 AC023141.5-201ENST00000458585 616 ntBASIC15.83■□□□□ 0.12
PRICKLE3O43900 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.83■□□□□ 0.12
PRICKLE3O43900 HLA-J-203ENST00000494367 1087 ntBASIC15.83■□□□□ 0.12
PRICKLE3O43900 SLC25A39P2-201ENST00000537614 270 ntBASIC15.83■□□□□ 0.12
PRICKLE3O43900 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.83■□□□□ 0.12
PRICKLE3O43900 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
PRICKLE3O43900 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.83■□□□□ 0.12
PRICKLE3O43900 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRICKLE3O43900 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRICKLE3O43900 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PRICKLE3O43900 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PRICKLE3O43900 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.83■□□□□ 0.12
PRICKLE3O43900 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRICKLE3O43900 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRICKLE3O43900 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.83■□□□□ 0.12
PRICKLE3O43900 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
PRICKLE3O43900 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRICKLE3O43900 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRICKLE3O43900 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRICKLE3O43900 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRICKLE3O43900 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PRICKLE3O43900 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.82■□□□□ 0.12
PRICKLE3O43900 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.82■□□□□ 0.12
PRICKLE3O43900 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRICKLE3O43900 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.82■□□□□ 0.12
PRICKLE3O43900 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRICKLE3O43900 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRICKLE3O43900 AL139400.1-201ENST00000366220 510 ntBASIC15.82■□□□□ 0.12
PRICKLE3O43900 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.82■□□□□ 0.12
PRICKLE3O43900 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.82■□□□□ 0.12
PRICKLE3O43900 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRICKLE3O43900 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.82■□□□□ 0.12
PRICKLE3O43900 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRICKLE3O43900 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.82■□□□□ 0.12
PRICKLE3O43900 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRICKLE3O43900 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.82■□□□□ 0.12
PRICKLE3O43900 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.82■□□□□ 0.12
PRICKLE3O43900 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.82■□□□□ 0.12
PRICKLE3O43900 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRICKLE3O43900 UXT-AS1-201ENST00000590504 1525 ntBASIC15.82■□□□□ 0.12
PRICKLE3O43900 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PRICKLE3O43900 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRICKLE3O43900 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRICKLE3O43900 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.82■□□□□ 0.12
PRICKLE3O43900 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRICKLE3O43900 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRICKLE3O43900 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRICKLE3O43900 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PRICKLE3O43900 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRICKLE3O43900 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.82■□□□□ 0.12
PRICKLE3O43900 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.82■□□□□ 0.12
PRICKLE3O43900 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.82■□□□□ 0.12
PRICKLE3O43900 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PRICKLE3O43900 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.82■□□□□ 0.12
PRICKLE3O43900 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRICKLE3O43900 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRICKLE3O43900 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PRICKLE3O43900 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRICKLE3O43900 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRICKLE3O43900 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRICKLE3O43900 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PRICKLE3O43900 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRICKLE3O43900 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRICKLE3O43900 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRICKLE3O43900 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PRICKLE3O43900 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PRICKLE3O43900 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.81■□□□□ 0.12
PRICKLE3O43900 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.81■□□□□ 0.12
PRICKLE3O43900 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.81■□□□□ 0.12
PRICKLE3O43900 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
PRICKLE3O43900 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.81■□□□□ 0.12
PRICKLE3O43900 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRICKLE3O43900 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRICKLE3O43900 AC098859.1-201ENST00000502915 1238 ntBASIC15.81■□□□□ 0.12
PRICKLE3O43900 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRICKLE3O43900 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRICKLE3O43900 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms