Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 RNPS1P1-201ENST00000507437 918 ntBASIC12.17□□□□□ -0.46
NACAE9PAV3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NACAE9PAV3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.17□□□□□ -0.46
NACAE9PAV3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.17□□□□□ -0.46
NACAE9PAV3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.17□□□□□ -0.46
NACAE9PAV3 NKAPP1-205ENST00000585790 367 ntBASIC12.17□□□□□ -0.46
NACAE9PAV3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.17□□□□□ -0.46
NACAE9PAV3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.17□□□□□ -0.46
NACAE9PAV3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NACAE9PAV3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
NACAE9PAV3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
NACAE9PAV3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.17□□□□□ -0.46
NACAE9PAV3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
NACAE9PAV3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
NACAE9PAV3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.17□□□□□ -0.46
NACAE9PAV3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
NACAE9PAV3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.17□□□□□ -0.46
NACAE9PAV3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.17□□□□□ -0.46
NACAE9PAV3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
NACAE9PAV3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NACAE9PAV3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NACAE9PAV3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NACAE9PAV3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NACAE9PAV3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NACAE9PAV3 AC132008.2-207ENST00000454517 770 ntBASIC12.17□□□□□ -0.46
NACAE9PAV3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NACAE9PAV3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.17□□□□□ -0.46
NACAE9PAV3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.17□□□□□ -0.46
NACAE9PAV3 MTDHP4-201ENST00000600287 670 ntBASIC12.17□□□□□ -0.46
NACAE9PAV3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NACAE9PAV3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NACAE9PAV3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.17□□□□□ -0.46
NACAE9PAV3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NACAE9PAV3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.17□□□□□ -0.46
NACAE9PAV3 AL596257.1-201ENST00000641463 2694 ntBASIC12.17□□□□□ -0.46
NACAE9PAV3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.17□□□□□ -0.46
NACAE9PAV3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NACAE9PAV3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.17□□□□□ -0.46
NACAE9PAV3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.16□□□□□ -0.46
NACAE9PAV3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.16□□□□□ -0.46
NACAE9PAV3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
NACAE9PAV3 AL391005.1-201ENST00000623953 2435 ntBASIC12.16□□□□□ -0.46
NACAE9PAV3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 TUBB8P12-201ENST00000308911 1335 ntBASIC12.16□□□□□ -0.46
NACAE9PAV3 TUBB7P-202ENST00000428444 1305 ntBASIC12.16□□□□□ -0.46
NACAE9PAV3 TUBB8P7-204ENST00000567960 1332 ntBASIC12.16□□□□□ -0.46
NACAE9PAV3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.16□□□□□ -0.46
NACAE9PAV3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
NACAE9PAV3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.16□□□□□ -0.46
NACAE9PAV3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.16□□□□□ -0.46
NACAE9PAV3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.16□□□□□ -0.46
NACAE9PAV3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.16□□□□□ -0.46
NACAE9PAV3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
NACAE9PAV3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.16□□□□□ -0.46
NACAE9PAV3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.16□□□□□ -0.46
NACAE9PAV3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.16□□□□□ -0.46
NACAE9PAV3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.16□□□□□ -0.46
NACAE9PAV3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.16□□□□□ -0.46
NACAE9PAV3 AC010327.4-202ENST00000591484 748 ntBASIC12.16□□□□□ -0.46
NACAE9PAV3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.16□□□□□ -0.46
NACAE9PAV3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.16□□□□□ -0.46
NACAE9PAV3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.16□□□□□ -0.46
NACAE9PAV3 PRAL-201ENST00000624952 3286 ntBASIC12.16□□□□□ -0.46
NACAE9PAV3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC12.16□□□□□ -0.46
NACAE9PAV3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
NACAE9PAV3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.16□□□□□ -0.46
NACAE9PAV3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.16□□□□□ -0.46
NACAE9PAV3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
NACAE9PAV3 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.16□□□□□ -0.46
NACAE9PAV3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 AL356309.3-201ENST00000624132 1934 ntBASIC12.16□□□□□ -0.46
NACAE9PAV3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.16□□□□□ -0.46
NACAE9PAV3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.16□□□□□ -0.46
NACAE9PAV3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NACAE9PAV3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC12.16□□□□□ -0.46
NACAE9PAV3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms