Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.33□□□□□ -0.28
SRRM4A7MD48 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.33□□□□□ -0.28
SRRM4A7MD48 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.33□□□□□ -0.28
SRRM4A7MD48 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.33□□□□□ -0.28
SRRM4A7MD48 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.33□□□□□ -0.28
SRRM4A7MD48 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.33□□□□□ -0.28
SRRM4A7MD48 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.33□□□□□ -0.28
SRRM4A7MD48 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SRRM4A7MD48 PAUPAR-201ENST00000630360 2965 ntBASIC13.33□□□□□ -0.28
SRRM4A7MD48 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRRM4A7MD48 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRRM4A7MD48 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRRM4A7MD48 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
SRRM4A7MD48 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SRRM4A7MD48 AL365203.3-201ENST00000609742 2057 ntBASIC13.33□□□□□ -0.28
SRRM4A7MD48 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.33□□□□□ -0.28
SRRM4A7MD48 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.33□□□□□ -0.28
SRRM4A7MD48 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRRM4A7MD48 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRRM4A7MD48 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SRRM4A7MD48 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 POU5F1P6-201ENST00000466990 990 ntBASIC13.32□□□□□ -0.28
SRRM4A7MD48 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.32□□□□□ -0.28
SRRM4A7MD48 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 SLC25A6P4-201ENST00000586535 553 ntBASIC13.32□□□□□ -0.28
SRRM4A7MD48 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.32□□□□□ -0.28
SRRM4A7MD48 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SRRM4A7MD48 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRRM4A7MD48 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SRRM4A7MD48 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.31□□□□□ -0.28
SRRM4A7MD48 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRRM4A7MD48 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.31□□□□□ -0.28
SRRM4A7MD48 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.31□□□□□ -0.28
SRRM4A7MD48 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRRM4A7MD48 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.31□□□□□ -0.28
SRRM4A7MD48 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
SRRM4A7MD48 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRRM4A7MD48 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.31□□□□□ -0.28
SRRM4A7MD48 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRRM4A7MD48 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRRM4A7MD48 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRRM4A7MD48 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SRRM4A7MD48 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.31□□□□□ -0.28
SRRM4A7MD48 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.31□□□□□ -0.28
SRRM4A7MD48 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRRM4A7MD48 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRRM4A7MD48 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRRM4A7MD48 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRRM4A7MD48 IGLL3P-201ENST00000412472 434 ntBASIC13.31□□□□□ -0.28
SRRM4A7MD48 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.31□□□□□ -0.28
SRRM4A7MD48 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.31□□□□□ -0.28
SRRM4A7MD48 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
SRRM4A7MD48 AC009078.2-202ENST00000463353 338 ntBASIC13.31□□□□□ -0.28
SRRM4A7MD48 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.31□□□□□ -0.28
SRRM4A7MD48 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.31□□□□□ -0.28
SRRM4A7MD48 RNA5SP415-201ENST00000517246 115 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms