Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 AC091304.2-201ENST00000564639 760 ntBASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 AC069224.1-201ENST00000566372 1715 ntBASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 GGTLC5P-201ENST00000617623 998 ntBASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 AC073621.1-201ENST00000392730 636 ntBASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 HCG4P8-203ENST00000443049 980 ntBASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 PRAL-201ENST00000624952 3286 ntBASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.65■□□□□ 0.26
TCRBV9S1A1TA0A576 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TCRBV9S1A1TA0A576 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 DUSP5P1-201ENST00000441325 1139 ntBASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 SAPCD2P3-201ENST00000455031 850 ntBASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 AF238378.1-201ENST00000526806 358 ntBASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TCRBV9S1A1TA0A576 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms