Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 AC027307.2-201ENST00000591252 911 ntBASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 AP001350.2-201ENST00000625104 1094 ntBASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 TOP3BP1-201ENST00000420768 1380 ntBASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA9Q9Y5G4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 GAPDHP21-201ENST00000450301 1010 ntBASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 AC027307.3-201ENST00000594262 1100 ntBASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 AL358472.5-202ENST00000641448 1267 ntBASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA9Q9Y5G4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA9Q9Y5G4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
PCDHGA9Q9Y5G4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PCDHGA9Q9Y5G4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms