Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 AL441883.1-201ENST00000566170 1045 ntBASIC15.69■□□□□ 0.1
AP4S1Q9Y587 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 AD001527.2-201ENST00000622994 785 ntBASIC15.69■□□□□ 0.1
AP4S1Q9Y587 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 SSR4P1-203ENST00000599569 2260 ntBASIC15.69■□□□□ 0.1
AP4S1Q9Y587 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP4S1Q9Y587 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 SNX33P1-201ENST00000592116 1762 ntBASIC15.68■□□□□ 0.1
AP4S1Q9Y587 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 POU5F1P6-201ENST00000466990 990 ntBASIC15.68■□□□□ 0.1
AP4S1Q9Y587 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 AC006486.2-201ENST00000624246 2199 ntBASIC15.68■□□□□ 0.1
AP4S1Q9Y587 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
AP4S1Q9Y587 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 MMP23A-201ENST00000234610 1017 ntBASIC15.67■□□□□ 0.1
AP4S1Q9Y587 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 MIR718-201ENST00000390190 70 ntBASIC15.67■□□□□ 0.1
AP4S1Q9Y587 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 GUSBP12-201ENST00000513727 720 ntBASIC15.67■□□□□ 0.1
AP4S1Q9Y587 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.67■□□□□ 0.1
AP4S1Q9Y587 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms