Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 AC243562.1-201ENST00000560672 389 ntBASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 AC084018.2-201ENST00000613093 2607 ntBASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 AL353732.1-201ENST00000569618 1459 ntBASIC15.27■□□□□ 0.03
NPIPA1Q9UND3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 AL021920.2-201ENST00000624828 1351 ntBASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 AKAP8P1-201ENST00000434743 1349 ntBASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 IGHV3-62-201ENST00000520057 340 ntBASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 SPCS2P1-201ENST00000561636 679 ntBASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 AL009183.1-201ENST00000603760 355 ntBASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 Z92544.3-201ENST00000624747 417 ntBASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NPIPA1Q9UND3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NPIPA1Q9UND3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms