Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 AL596257.1-201ENST00000641463 2694 ntBASIC14.03□□□□□ -0.16
CLN8Q9UBY8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLN8Q9UBY8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLN8Q9UBY8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLN8Q9UBY8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLN8Q9UBY8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.03□□□□□ -0.16
CLN8Q9UBY8 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLN8Q9UBY8 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLN8Q9UBY8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLN8Q9UBY8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CLN8Q9UBY8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLN8Q9UBY8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLN8Q9UBY8 AC092171.3-201ENST00000610122 2651 ntBASIC14.02□□□□□ -0.16
CLN8Q9UBY8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLN8Q9UBY8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
CLN8Q9UBY8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLN8Q9UBY8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLN8Q9UBY8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLN8Q9UBY8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLN8Q9UBY8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLN8Q9UBY8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLN8Q9UBY8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLN8Q9UBY8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.02□□□□□ -0.16
CLN8Q9UBY8 AC012569.1-201ENST00000591191 1524 ntBASIC14.02□□□□□ -0.16
CLN8Q9UBY8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 HCG4-201ENST00000418983 998 ntBASIC14.02□□□□□ -0.17
CLN8Q9UBY8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 AC068418.2-201ENST00000577309 3703 ntBASIC14.02□□□□□ -0.17
CLN8Q9UBY8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 AC078925.2-201ENST00000624013 1973 ntBASIC14.02□□□□□ -0.17
CLN8Q9UBY8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CLN8Q9UBY8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 AC112482.1-201ENST00000492080 688 ntBASIC14.01□□□□□ -0.17
CLN8Q9UBY8 AC112191.1-201ENST00000523689 701 ntBASIC14.01□□□□□ -0.17
CLN8Q9UBY8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 AC139530.3-201ENST00000620344 690 ntBASIC14.01□□□□□ -0.17
CLN8Q9UBY8 AC079781.4-201ENST00000641908 219 ntBASIC14.01□□□□□ -0.17
CLN8Q9UBY8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN8Q9UBY8 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms