Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 FAM215A-202ENST00000632077 792 ntBASIC16.65■□□□□ 0.26
CCDC68Q9H2F9 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC68Q9H2F9 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC68Q9H2F9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC68Q9H2F9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC68Q9H2F9 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC68Q9H2F9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC68Q9H2F9 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC68Q9H2F9 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC68Q9H2F9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC68Q9H2F9 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC68Q9H2F9 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CCDC68Q9H2F9 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC68Q9H2F9 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC68Q9H2F9 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC68Q9H2F9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC68Q9H2F9 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CCDC68Q9H2F9 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC68Q9H2F9 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC68Q9H2F9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCDC68Q9H2F9 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCDC68Q9H2F9 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 C8orf49-201ENST00000525043 1968 ntBASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 HCG4-201ENST00000418983 998 ntBASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 AC092910.1-201ENST00000482027 1129 ntBASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 AC012640.2-201ENST00000561606 901 ntBASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 MIR4492-201ENST00000581627 80 ntBASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC68Q9H2F9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 AC107918.2-201ENST00000530817 355 ntBASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 AP002469.2-201ENST00000531724 424 ntBASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 AL160237.2-201ENST00000556165 472 ntBASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 CYP2A7P1-201ENST00000595391 815 ntBASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 AC148477.8-201ENST00000624298 468 ntBASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC68Q9H2F9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms