Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 GGT4P-201ENST00000623672 1708 ntBASIC15.26■□□□□ 0.03
TRIM2Q9C040 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.26■□□□□ 0.03
TRIM2Q9C040 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 AC116407.3-201ENST00000623905 1129 ntBASIC15.26■□□□□ 0.03
TRIM2Q9C040 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 AC092364.2-201ENST00000596710 2692 ntBASIC15.26■□□□□ 0.03
TRIM2Q9C040 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 AP002414.3-201ENST00000589352 1468 ntBASIC15.26■□□□□ 0.03
TRIM2Q9C040 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRIM2Q9C040 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM2Q9C040 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 AC018695.7-201ENST00000624587 2492 ntBASIC15.25■□□□□ 0.03
TRIM2Q9C040 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM2Q9C040 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM2Q9C040 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM2Q9C040 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.25■□□□□ 0.03
TRIM2Q9C040 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 AC106730.1-201ENST00000566722 1090 ntBASIC15.25■□□□□ 0.03
TRIM2Q9C040 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM2Q9C040 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM2Q9C040 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM2Q9C040 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM2Q9C040 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM2Q9C040 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.25■□□□□ 0.03
TRIM2Q9C040 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 AL391005.1-201ENST00000623953 2435 ntBASIC15.25■□□□□ 0.03
TRIM2Q9C040 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM2Q9C040 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM2Q9C040 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM2Q9C040 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRIM2Q9C040 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM2Q9C040 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM2Q9C040 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM2Q9C040 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM2Q9C040 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 GPAA1P2-202ENST00000606848 1787 ntBASIC15.24■□□□□ 0.03
TRIM2Q9C040 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM2Q9C040 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM2Q9C040 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms