Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 AL353732.1-201ENST00000569618 1459 ntBASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 AC129492.6-201ENST00000611383 1305 ntBASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
YIPF4Q9BSR8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 RPL13AP23-201ENST00000480739 586 ntBASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 AC108751.1-201ENST00000490852 363 ntBASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 AL139011.1-202ENST00000642063 584 ntBASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 PMS2P7-201ENST00000506558 1336 ntBASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.62■□□□□ 0.09
YIPF4Q9BSR8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 AL031731.1-201ENST00000642131 2094 ntBASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 KRT8P39-201ENST00000396270 1433 ntBASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
YIPF4Q9BSR8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms