Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
LITAFQ99732 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
LITAFQ99732 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LITAFQ99732 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC11.02□□□□□ -0.65
LITAFQ99732 ECEL1P3-201ENST00000427961 737 ntBASIC11.02□□□□□ -0.65
LITAFQ99732 AC012618.2-201ENST00000428058 849 ntBASIC11.02□□□□□ -0.65
LITAFQ99732 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC11.02□□□□□ -0.65
LITAFQ99732 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC11.02□□□□□ -0.65
LITAFQ99732 AC128688.1-201ENST00000487626 519 ntBASIC11.02□□□□□ -0.65
LITAFQ99732 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LITAFQ99732 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC11.02□□□□□ -0.65
LITAFQ99732 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC11.02□□□□□ -0.65
LITAFQ99732 REXO2-216ENST00000544196 452 ntTSL 3 BASIC11.02□□□□□ -0.65
LITAFQ99732 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC11.02□□□□□ -0.65
LITAFQ99732 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
LITAFQ99732 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC11.02□□□□□ -0.65
LITAFQ99732 AC233702.5-201ENST00000584107 538 ntBASIC11.02□□□□□ -0.65
LITAFQ99732 AC005332.3-201ENST00000589904 676 ntBASIC11.02□□□□□ -0.65
LITAFQ99732 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LITAFQ99732 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC11.02□□□□□ -0.65
LITAFQ99732 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC11.02□□□□□ -0.65
LITAFQ99732 AL138831.2-201ENST00000606564 490 ntBASIC11.02□□□□□ -0.65
LITAFQ99732 FAM87A-204ENST00000613235 858 ntBASIC11.02□□□□□ -0.65
LITAFQ99732 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LITAFQ99732 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LITAFQ99732 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
LITAFQ99732 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC11.02□□□□□ -0.65
LITAFQ99732 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
LITAFQ99732 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC11.02□□□□□ -0.65
LITAFQ99732 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LITAFQ99732 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LITAFQ99732 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
LITAFQ99732 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LITAFQ99732 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
LITAFQ99732 PARN-202ENST00000420015 2360 ntTSL 2 BASIC11.02□□□□□ -0.65
LITAFQ99732 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC11.02□□□□□ -0.65
LITAFQ99732 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
LITAFQ99732 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC11.02□□□□□ -0.65
LITAFQ99732 AP003680.1-201ENST00000598970 3660 ntBASIC11.02□□□□□ -0.65
LITAFQ99732 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
LITAFQ99732 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LITAFQ99732 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LITAFQ99732 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LITAFQ99732 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11.01□□□□□ -0.65
LITAFQ99732 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC11.01□□□□□ -0.65
LITAFQ99732 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
LITAFQ99732 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LITAFQ99732 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.01□□□□□ -0.65
LITAFQ99732 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC11.01□□□□□ -0.65
LITAFQ99732 GPI-205ENST00000586425 1799 ntTSL 5 BASIC11.01□□□□□ -0.65
LITAFQ99732 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC11.01□□□□□ -0.65
LITAFQ99732 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.01□□□□□ -0.65
LITAFQ99732 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC11.01□□□□□ -0.65
LITAFQ99732 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
LITAFQ99732 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC11.01□□□□□ -0.65
LITAFQ99732 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LITAFQ99732 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC11.01□□□□□ -0.65
LITAFQ99732 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
LITAFQ99732 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
LITAFQ99732 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
LITAFQ99732 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LITAFQ99732 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
LITAFQ99732 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC11.01□□□□□ -0.65
LITAFQ99732 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC11.01□□□□□ -0.65
LITAFQ99732 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11.01□□□□□ -0.65
LITAFQ99732 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.01□□□□□ -0.65
LITAFQ99732 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC11.01□□□□□ -0.65
LITAFQ99732 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LITAFQ99732 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms