Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 ELK2BP-201ENST00000415014 1224 ntBASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 MTDHP3-201ENST00000594186 672 ntBASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 CYP2A7P1-201ENST00000595391 815 ntBASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 CROCCP1-201ENST00000426910 5675 ntBASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.2■□□□□ 0.66
CHAMP1Q96JM3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 AL356309.3-201ENST00000624132 1934 ntBASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.19■□□□□ 0.66
CHAMP1Q96JM3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 PI4KAP1-204ENST00000612579 1703 ntBASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHAMP1Q96JM3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms