Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 AC108751.1-201ENST00000490852 363 ntBASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 MIR7706-201ENST00000613747 67 ntBASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRAF3IP1Q8TDR0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 AC012569.1-201ENST00000591191 1524 ntBASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 AC098831.1-202ENST00000438821 336 ntBASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 AL049840.3-201ENST00000602669 611 ntBASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP1Q8TDR0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRAF3IP1Q8TDR0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
TRAF3IP1Q8TDR0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.27■□□□□ 0.35
TRAF3IP1Q8TDR0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TRAF3IP1Q8TDR0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.27■□□□□ 0.35
TRAF3IP1Q8TDR0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TRAF3IP1Q8TDR0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TRAF3IP1Q8TDR0 GGT4P-201ENST00000623672 1708 ntBASIC17.27■□□□□ 0.35
TRAF3IP1Q8TDR0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAF3IP1Q8TDR0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.27■□□□□ 0.35
TRAF3IP1Q8TDR0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms