Protein–RNA interactions for Protein: Q8TAT5

NEIL3, Endonuclease 8-like 3, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3Q8TAT5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NEIL3Q8TAT5 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.42■□□□□ 0.06
NEIL3Q8TAT5 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.42■□□□□ 0.06
NEIL3Q8TAT5 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEIL3Q8TAT5 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEIL3Q8TAT5 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEIL3Q8TAT5 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NEIL3Q8TAT5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEIL3Q8TAT5 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEIL3Q8TAT5 AC025580.3-201ENST00000617932 1424 ntBASIC15.42■□□□□ 0.06
NEIL3Q8TAT5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEIL3Q8TAT5 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NEIL3Q8TAT5 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEIL3Q8TAT5 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.42■□□□□ 0.06
NEIL3Q8TAT5 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.42■□□□□ 0.06
NEIL3Q8TAT5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NEIL3Q8TAT5 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEIL3Q8TAT5 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 AC004967.1-201ENST00000453589 447 ntBASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 AL513523.2-202ENST00000427283 2040 ntBASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 AC132872.4-202ENST00000622924 2756 ntBASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEIL3Q8TAT5 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 AL662844.4-201ENST00000606367 2838 ntBASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NEIL3Q8TAT5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms