Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.41□□□□□ -0.42
NUP35Q8NFH5 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 RASA4DP-201ENST00000460726 1199 ntBASIC12.41□□□□□ -0.42
NUP35Q8NFH5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 GCSHP2-201ENST00000560971 527 ntBASIC12.41□□□□□ -0.42
NUP35Q8NFH5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 TMBIM7P-203ENST00000641617 1718 ntBASIC12.41□□□□□ -0.42
NUP35Q8NFH5 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 AC020658.6-201ENST00000623564 1870 ntBASIC12.4□□□□□ -0.42
NUP35Q8NFH5 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 AC012618.2-201ENST00000428058 849 ntBASIC12.4□□□□□ -0.42
NUP35Q8NFH5 HLA-F-220ENST00000434407 884 ntBASIC12.4□□□□□ -0.42
NUP35Q8NFH5 POU5F1P6-201ENST00000466990 990 ntBASIC12.4□□□□□ -0.42
NUP35Q8NFH5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 AC233702.5-201ENST00000584107 538 ntBASIC12.4□□□□□ -0.42
NUP35Q8NFH5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms