Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SRFBP1Q8NEF9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRFBP1Q8NEF9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRFBP1Q8NEF9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SRFBP1Q8NEF9 PCGF3-213ENST00000620529 1899 ntBASIC15.82■□□□□ 0.12
SRFBP1Q8NEF9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.82■□□□□ 0.12
SRFBP1Q8NEF9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
SRFBP1Q8NEF9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
SRFBP1Q8NEF9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.82■□□□□ 0.12
SRFBP1Q8NEF9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SRFBP1Q8NEF9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRFBP1Q8NEF9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.82■□□□□ 0.12
SRFBP1Q8NEF9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 AC002056.1-201ENST00000395613 760 ntBASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 POU5F1P6-201ENST00000466990 990 ntBASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRFBP1Q8NEF9 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 ME2P1-201ENST00000426028 1970 ntBASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 MIR574-201ENST00000385209 96 ntBASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 AC112191.1-201ENST00000523689 701 ntBASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 AC092171.3-201ENST00000610122 2651 ntBASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.8■□□□□ 0.12
SRFBP1Q8NEF9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms