Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.52■□□□□ 0.4
TMEM35BQ8NCS4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
TMEM35BQ8NCS4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.52■□□□□ 0.4
TMEM35BQ8NCS4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TMEM35BQ8NCS4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM35BQ8NCS4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.52■□□□□ 0.4
TMEM35BQ8NCS4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM35BQ8NCS4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.52■□□□□ 0.4
TMEM35BQ8NCS4 AC068137.2-201ENST00000605408 478 ntBASIC17.52■□□□□ 0.4
TMEM35BQ8NCS4 AL513190.1-201ENST00000621254 727 ntBASIC17.52■□□□□ 0.4
TMEM35BQ8NCS4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.52■□□□□ 0.4
TMEM35BQ8NCS4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.52■□□□□ 0.4
TMEM35BQ8NCS4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.52■□□□□ 0.4
TMEM35BQ8NCS4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM35BQ8NCS4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM35BQ8NCS4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM35BQ8NCS4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM35BQ8NCS4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM35BQ8NCS4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM35BQ8NCS4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.52■□□□□ 0.39
TMEM35BQ8NCS4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.52■□□□□ 0.39
TMEM35BQ8NCS4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM35BQ8NCS4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.52■□□□□ 0.39
TMEM35BQ8NCS4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.52■□□□□ 0.39
TMEM35BQ8NCS4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM35BQ8NCS4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM35BQ8NCS4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TMEM35BQ8NCS4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM35BQ8NCS4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.52■□□□□ 0.39
TMEM35BQ8NCS4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.52■□□□□ 0.39
TMEM35BQ8NCS4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM35BQ8NCS4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 AC092865.6-201ENST00000642101 219 ntBASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.51■□□□□ 0.39
TMEM35BQ8NCS4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 KRT18P34-201ENST00000488218 1270 ntBASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM35BQ8NCS4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms